Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm23602-201ENSMUST00000157258 132 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm23326-201ENSMUST00000157419 105 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm22310-201ENSMUST00000157509 116 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm21827-201ENSMUST00000178247 423 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm23933-201ENSMUST00000178405 79 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm26928-201ENSMUST00000182674 572 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm23039-201ENSMUST00000083870 161 ntBASIC4.07□□□□□ -1.76
Clp1Q99LI9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Clp1Q99LI9 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Clp1Q99LI9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm23202-201ENSMUST00000104376 129 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Snord19-201ENSMUST00000104609 76 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm23466-201ENSMUST00000157133 106 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm24846-201ENSMUST00000158033 108 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm7592-201ENSMUST00000160674 627 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm7582-201ENSMUST00000160831 603 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm22859-201ENSMUST00000174978 122 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm27761-201ENSMUST00000184091 131 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm28500-201ENSMUST00000190286 151 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Mir3068-202ENSMUST00000197755 79 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm45080-201ENSMUST00000206648 283 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm24626-201ENSMUST00000082621 161 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Clp1Q99LI9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Clp1Q99LI9 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.06□□□□□ -1.76
Clp1Q99LI9 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm5937-201ENSMUST00000119715 643 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm22527-201ENSMUST00000158816 106 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm4468-201ENSMUST00000170206 294 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 AC154296.1-201ENSMUST00000198150 67 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm44703-201ENSMUST00000205724 248 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm25205-201ENSMUST00000082841 103 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm24163-201ENSMUST00000093660 132 ntBASIC4.05□□□□□ -1.76
Clp1Q99LI9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Clp1Q99LI9 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Clp1Q99LI9 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Mir673-201ENSMUST00000102361 91 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm14861-201ENSMUST00000119451 455 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm24908-201ENSMUST00000157294 127 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm22217-201ENSMUST00000157556 313 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm20058-201ENSMUST00000186939 284 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm38183-201ENSMUST00000193189 205 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm37624-201ENSMUST00000193751 219 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm37290-201ENSMUST00000195775 339 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm10161-201ENSMUST00000091506 204 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.04□□□□□ -1.76
Clp1Q99LI9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Clp1Q99LI9 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Gm22097-201ENSMUST00000157929 278 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Gm17159-201ENSMUST00000169043 482 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Gm28010-201ENSMUST00000179485 126 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Gm21007-201ENSMUST00000221024 326 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.03□□□□□ -1.76
Clp1Q99LI9 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Clp1Q99LI9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm24244-201ENSMUST00000157317 130 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms