Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm28000-201ENSMUST00000184380 85 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm27694-201ENSMUST00000184740 86 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm26379-202ENSMUST00000200225 132 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Ushbp1Q8R370 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm23615-201ENSMUST00000082602 65 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm25698-201ENSMUST00000082897 107 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm26066-201ENSMUST00000083385 109 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Rny1-201ENSMUST00000083767 112 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Mir1198-201ENSMUST00000116995 121 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm13761-201ENSMUST00000117238 807 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm12647-201ENSMUST00000118977 265 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm11794-201ENSMUST00000119446 237 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm14877-201ENSMUST00000119803 478 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm22026-201ENSMUST00000122735 281 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm14389-201ENSMUST00000140453 241 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm22598-201ENSMUST00000157600 127 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Mir6916-201ENSMUST00000184514 63 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm6615-201ENSMUST00000199426 631 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm44844-201ENSMUST00000207242 336 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm45678-201ENSMUST00000210509 295 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm23845-201ENSMUST00000083834 152 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.56□□□□□ -1.84
Ushbp1Q8R370 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm15029-201ENSMUST00000119742 199 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm12956-201ENSMUST00000122184 414 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm25054-201ENSMUST00000157370 97 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm22814-201ENSMUST00000157452 104 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm23380-201ENSMUST00000158448 103 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm24415-201ENSMUST00000180218 107 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm27783-201ENSMUST00000183534 105 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm28288-201ENSMUST00000191019 214 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm22249-201ENSMUST00000082485 136 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm24042-201ENSMUST00000083114 103 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm23454-201ENSMUST00000083332 133 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Gm10222-201ENSMUST00000088336 294 ntBASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ushbp1Q8R370 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Ushbp1Q8R370 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm12071-201ENSMUST00000121968 469 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm15213-201ENSMUST00000122098 216 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm24481-201ENSMUST00000157210 102 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm22538-201ENSMUST00000158169 299 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm23196-201ENSMUST00000158806 107 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm27747-201ENSMUST00000184707 85 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm45365-201ENSMUST00000209489 256 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm19563-201ENSMUST00000222031 270 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm26166-201ENSMUST00000083788 107 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ushbp1Q8R370 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm22779-201ENSMUST00000104085 107 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm25565-201ENSMUST00000104605 105 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm13439-201ENSMUST00000117541 409 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm15215-201ENSMUST00000117773 489 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm27997-201ENSMUST00000184942 69 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm38238-201ENSMUST00000194334 346 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms