Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm25362-201ENSMUST00000158854 105 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm29597-201ENSMUST00000188035 308 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm28288-201ENSMUST00000191019 214 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm29665-201ENSMUST00000191457 528 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm24350-202ENSMUST00000198309 132 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm45207-201ENSMUST00000207469 145 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm19563-201ENSMUST00000222031 270 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Mir1195-201ENSMUST00000116818 98 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm14298-201ENSMUST00000139032 237 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm16356-201ENSMUST00000143300 169 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm25391-201ENSMUST00000157342 134 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm27510-201ENSMUST00000158214 64 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm7329-201ENSMUST00000185915 210 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm19177-201ENSMUST00000204520 613 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm44844-201ENSMUST00000207242 336 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm45315-201ENSMUST00000209283 333 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm18015-201ENSMUST00000214879 316 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Vps53Q8CCB4 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm23941-201ENSMUST00000101953 107 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm24890-201ENSMUST00000104389 102 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm14296-202ENSMUST00000108931 750 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm25718-201ENSMUST00000158632 118 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm37586-201ENSMUST00000193654 204 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm32222-201ENSMUST00000203296 298 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Gm44881-201ENSMUST00000205425 367 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Vps53Q8CCB4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
Vps53Q8CCB4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm13378-201ENSMUST00000117483 336 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm13457-201ENSMUST00000117885 267 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm23184-201ENSMUST00000122594 131 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm24481-201ENSMUST00000157210 102 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm25220-201ENSMUST00000157546 95 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm17187-201ENSMUST00000164622 410 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm23053-201ENSMUST00000175136 96 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm23141-201ENSMUST00000178682 94 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm25121-201ENSMUST00000179846 79 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm29397-201ENSMUST00000185205 333 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm44966-201ENSMUST00000208096 157 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm23738-201ENSMUST00000082828 171 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm25257-201ENSMUST00000083907 110 ntBASIC3.46□□□□□ -1.86
Vps53Q8CCB4 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm11935-201ENSMUST00000118608 399 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm23470-201ENSMUST00000157129 120 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm23956-201ENSMUST00000157211 119 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm24691-201ENSMUST00000157762 140 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm25956-201ENSMUST00000175115 217 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm20651-201ENSMUST00000177219 329 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm35931-201ENSMUST00000203931 448 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Vps53Q8CCB4 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Vps53Q8CCB4 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm650-201ENSMUST00000144428 1551 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm11936-201ENSMUST00000118323 160 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm17065-201ENSMUST00000165245 239 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm26426-201ENSMUST00000177866 123 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm26060-201ENSMUST00000180094 123 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm45313-201ENSMUST00000210584 178 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm7422-201ENSMUST00000220115 640 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.44□□□□□ -1.86
Vps53Q8CCB4 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.43□□□□□ -1.86
Vps53Q8CCB4 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 203.3 ms