Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Olfr197-201ENSMUST00000080031 926 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm24142-201ENSMUST00000101960 107 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm7350-201ENSMUST00000120964 636 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm15223-201ENSMUST00000120989 826 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm25961-201ENSMUST00000157174 135 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm2966-201ENSMUST00000166052 481 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Mir6388-201ENSMUST00000184417 75 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.51□□□□□ -2.33
Col6a6Q8C6K9 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm25544-201ENSMUST00000122676 120 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm43171-201ENSMUST00000199882 291 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm25810-201ENSMUST00000082752 108 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm23792-201ENSMUST00000122557 93 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm25621-201ENSMUST00000157223 114 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Mir1949-201ENSMUST00000157434 141 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm27588-201ENSMUST00000185096 263 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm29460-201ENSMUST00000188607 714 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm20832-201ENSMUST00000189076 665 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm36728-201ENSMUST00000195782 665 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm33654-201ENSMUST00000221704 215 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm26206-201ENSMUST00000082908 110 ntBASIC0.5□□□□□ -2.33
Col6a6Q8C6K9 Gm23907-201ENSMUST00000104595 189 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm14774-201ENSMUST00000117857 536 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm14918-201ENSMUST00000118153 268 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm12507-201ENSMUST00000119155 415 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm16373-201ENSMUST00000129517 303 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm23124-201ENSMUST00000157650 107 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm22074-201ENSMUST00000158595 113 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm25598-201ENSMUST00000179031 107 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm37029-201ENSMUST00000195773 239 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm42807-201ENSMUST00000200141 329 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm8940-201ENSMUST00000212585 219 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm25335-201ENSMUST00000158043 103 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm20630-201ENSMUST00000177387 551 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm45438-201ENSMUST00000210242 564 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Col6a6Q8C6K9 Gm23749-201ENSMUST00000104223 131 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm9001-201ENSMUST00000121642 399 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm8502-201ENSMUST00000185708 901 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm18691-201ENSMUST00000203593 872 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm21089-201ENSMUST00000215843 325 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Mir208a-201ENSMUST00000083498 83 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm12392-201ENSMUST00000118014 938 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm14360-201ENSMUST00000120670 393 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm26195-201ENSMUST00000175035 101 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm21171-201ENSMUST00000180048 673 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm44459-201ENSMUST00000203926 160 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm10298-201ENSMUST00000074801 265 ntBASIC0.48□□□□□ -2.33
Col6a6Q8C6K9 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm15126-201ENSMUST00000118631 833 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm14915-201ENSMUST00000120747 204 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm24592-201ENSMUST00000122505 106 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Mir5101-201ENSMUST00000175181 83 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm45530-201ENSMUST00000211658 225 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 AC154257.2-201ENSMUST00000224166 340 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm22082-201ENSMUST00000157587 161 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm24777-201ENSMUST00000157644 107 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm24419-201ENSMUST00000157875 332 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms