Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm22266-201ENSMUST00000104011 138 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm23083-201ENSMUST00000157851 116 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm26045-201ENSMUST00000157862 97 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Scarna13-201ENSMUST00000158164 275 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm37882-201ENSMUST00000195254 196 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm44456-201ENSMUST00000196554 89 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm45185-201ENSMUST00000207556 404 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm25187-201ENSMUST00000083906 133 ntBASIC5.18□□□□□ -1.58
Trim35Q8C006 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Trim35Q8C006 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim35Q8C006 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm24171-201ENSMUST00000104126 131 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm14586-201ENSMUST00000119571 408 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm29596-201ENSMUST00000185710 385 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm37421-201ENSMUST00000193088 132 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm43712-201ENSMUST00000198020 291 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm45660-201ENSMUST00000210267 151 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Neat1-201ENSMUST00000173672 20771 ntBASIC5.17□□□□□ -1.58
Trim35Q8C006 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim35Q8C006 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim35Q8C006 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim35Q8C006 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Trim35Q8C006 Gm8935-201ENSMUST00000066794 2798 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Gm38031-201ENSMUST00000191819 3015 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim35Q8C006 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim35Q8C006 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim35Q8C006 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Mir6412-201ENSMUST00000184477 97 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Gm6801-201ENSMUST00000190697 339 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Gm18346-201ENSMUST00000216782 325 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Gm23727-201ENSMUST00000083352 164 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim35Q8C006 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Trim35Q8C006 Gm42870-201ENSMUST00000199355 3470 ntBASIC5.16□□□□□ -1.58
Trim35Q8C006 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim35Q8C006 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Trim35Q8C006 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Trim35Q8C006 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.15□□□□□ -1.58
Trim35Q8C006 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Trim35Q8C006 Gm26080-201ENSMUST00000104069 131 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm24429-201ENSMUST00000104076 132 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm15799-201ENSMUST00000120899 289 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm15281-201ENSMUST00000125181 351 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm10357-201ENSMUST00000159886 264 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Gm27611-201ENSMUST00000184690 108 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Mir208a-201ENSMUST00000083498 83 ntBASIC5.15□□□□□ -1.59
Trim35Q8C006 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC5.15□□□□□ -1.59
Trim35Q8C006 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim35Q8C006 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim35Q8C006 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim35Q8C006 Gm24350-201ENSMUST00000104163 133 ntBASIC5.14□□□□□ -1.59
Trim35Q8C006 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim35Q8C006 Traj61-201ENSMUST00000165025 72 ntBASIC5.14□□□□□ -1.59
Trim35Q8C006 Mir6928-201ENSMUST00000185166 70 ntBASIC5.14□□□□□ -1.59
Trim35Q8C006 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim35Q8C006 Gm22306-201ENSMUST00000082692 107 ntBASIC5.14□□□□□ -1.59
Trim35Q8C006 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Trim35Q8C006 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim35Q8C006 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim35Q8C006 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim35Q8C006 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.14□□□□□ -1.59
Trim35Q8C006 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Trim35Q8C006 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim35Q8C006 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim35Q8C006 Gm37331-201ENSMUST00000192367 3375 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 Gm11631-201ENSMUST00000119220 156 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 Gm12808-201ENSMUST00000120597 404 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 Gm32381-201ENSMUST00000203192 476 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 Gm23508-201ENSMUST00000083079 72 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 Snord80-201ENSMUST00000083801 81 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 n-R5s183-201ENSMUST00000083939 115 ntBASIC5.13□□□□□ -1.59
Trim35Q8C006 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim35Q8C006 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim35Q8C006 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim35Q8C006 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms