Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm23779-201ENSMUST00000157938 64 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm23380-201ENSMUST00000158448 103 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm3027-201ENSMUST00000167579 451 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Mir6353-201ENSMUST00000183596 113 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm29397-201ENSMUST00000185205 333 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm28647-201ENSMUST00000188416 197 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm44989-201ENSMUST00000204749 217 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm25199-201ENSMUST00000083095 104 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Snord104-201ENSMUST00000083192 70 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Upk3bQ80YF6 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Snora36b-201ENSMUST00000104383 132 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Mir467g-201ENSMUST00000116906 120 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm13396-201ENSMUST00000120617 271 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm23223-201ENSMUST00000158119 127 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm24879-201ENSMUST00000158386 143 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm20698-201ENSMUST00000175657 233 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm32033-201ENSMUST00000193483 339 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm44476-201ENSMUST00000196225 91 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm6059-201ENSMUST00000196903 340 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Mir6375-201ENSMUST00000197176 95 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm44858-201ENSMUST00000207360 154 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm45522-201ENSMUST00000210784 166 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.21□□□□□ -2.06
Upk3bQ80YF6 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Mir208a-201ENSMUST00000083498 83 ntBASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Upk3bQ80YF6 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Upk3bQ80YF6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm11065-201ENSMUST00000111462 228 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm13457-201ENSMUST00000117885 267 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm14940-201ENSMUST00000119309 495 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm11363-201ENSMUST00000121672 548 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Mir5624-201ENSMUST00000176635 61 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm27410-201ENSMUST00000183851 115 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm6060-201ENSMUST00000188671 251 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm28951-201ENSMUST00000190742 313 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm43600-201ENSMUST00000202134 223 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm44446-201ENSMUST00000204864 255 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm21937-201ENSMUST00000222825 218 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Upk3bQ80YF6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm27926-201ENSMUST00000157180 66 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm24885-201ENSMUST00000158783 270 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm23196-201ENSMUST00000158806 107 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm17166-201ENSMUST00000172006 431 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm25476-201ENSMUST00000175125 185 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm24618-201ENSMUST00000177718 94 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm23953-201ENSMUST00000178214 94 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm26332-201ENSMUST00000179813 94 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm22863-201ENSMUST00000180265 94 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Mir195b-201ENSMUST00000184814 97 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm44055-201ENSMUST00000204376 247 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm23721-201ENSMUST00000083005 107 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm24316-201ENSMUST00000083041 107 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Gm23679-201ENSMUST00000083161 119 ntBASIC2.19□□□□□ -2.06
Upk3bQ80YF6 Mir137-201ENSMUST00000083635 73 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms