Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim56Q80VI1 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Mir323-201ENSMUST00000083683 86 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm13076-201ENSMUST00000118041 204 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm15799-201ENSMUST00000120899 289 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm22957-201ENSMUST00000122511 123 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm24726-201ENSMUST00000158232 121 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm24314-201ENSMUST00000158274 123 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim56Q80VI1 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm5175-202ENSMUST00000219699 529 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm26204-201ENSMUST00000082906 107 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim56Q80VI1 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.07□□□□□ -1.76
Trim56Q80VI1 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm23472-201ENSMUST00000101806 191 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm12025-201ENSMUST00000117768 144 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm14845-201ENSMUST00000121259 306 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm11204-201ENSMUST00000122438 147 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm25115-201ENSMUST00000157187 140 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm26005-201ENSMUST00000158802 134 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm24497-201ENSMUST00000177868 191 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm28030-201ENSMUST00000184987 138 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm18188-201ENSMUST00000219386 478 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm23444-201ENSMUST00000082922 191 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.06□□□□□ -1.76
Trim56Q80VI1 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim56Q80VI1 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm26026-201ENSMUST00000122726 123 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm25805-201ENSMUST00000122788 108 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm22792-201ENSMUST00000157225 133 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm23331-201ENSMUST00000157423 108 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm23671-201ENSMUST00000157472 103 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm24959-201ENSMUST00000157924 146 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm22381-201ENSMUST00000158186 107 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm28650-201ENSMUST00000188413 411 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm37624-201ENSMUST00000193751 219 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm42526-201ENSMUST00000198956 393 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm32381-201ENSMUST00000203192 476 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm44703-201ENSMUST00000205724 248 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm5358-201ENSMUST00000212814 353 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.05□□□□□ -1.76
Trim56Q80VI1 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm13314-201ENSMUST00000118742 335 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm12934-201ENSMUST00000119221 343 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm23592-201ENSMUST00000157859 117 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm28591-201ENSMUST00000185259 183 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm28627-201ENSMUST00000186141 453 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Trbv6-201ENSMUST00000193743 276 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm44520-201ENSMUST00000205447 802 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Snora31-201ENSMUST00000083213 130 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gm23453-201ENSMUST00000083326 106 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.04□□□□□ -1.76
Trim56Q80VI1 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim56Q80VI1 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim56Q80VI1 Mir673-201ENSMUST00000102361 91 ntBASIC4.03□□□□□ -1.76
Trim56Q80VI1 Gm24403-201ENSMUST00000104616 130 ntBASIC4.03□□□□□ -1.76
Trim56Q80VI1 Gm24132-201ENSMUST00000104745 91 ntBASIC4.03□□□□□ -1.76
Trim56Q80VI1 Mdga2-203ENSMUST00000113942 423 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms