Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25731-201ENSMUST00000175167 125 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm27220-201ENSMUST00000183453 262 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Mir21b-201ENSMUST00000184317 108 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm28755-201ENSMUST00000185773 199 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm18502-201ENSMUST00000218679 199 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24356-201ENSMUST00000082859 106 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm25581-201ENSMUST00000083410 164 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm25833-201ENSMUST00000104137 133 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24403-201ENSMUST00000104616 130 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Mir1b-201ENSMUST00000117012 122 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm15613-201ENSMUST00000118396 326 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22792-201ENSMUST00000157225 133 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24726-201ENSMUST00000158232 121 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24930-201ENSMUST00000158315 83 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm26157-201ENSMUST00000158974 126 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm2862-201ENSMUST00000161524 328 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm26460-201ENSMUST00000175061 126 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm10067-201ENSMUST00000179462 348 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Mir6383-201ENSMUST00000184545 116 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Gm4644-201ENSMUST00000197587 400 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.84□□□□□ -1.79
Sh3rf1Q69ZI1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Sh3rf1Q69ZI1 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Sh3rf1Q69ZI1 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm24282-201ENSMUST00000104232 66 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm24234-201ENSMUST00000104316 107 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm13432-201ENSMUST00000118861 241 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm14282-201ENSMUST00000119484 240 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm26476-201ENSMUST00000122618 313 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22883-201ENSMUST00000157376 106 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm25424-201ENSMUST00000157612 58 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm23586-201ENSMUST00000157657 123 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22139-201ENSMUST00000158747 105 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm23152-201ENSMUST00000175322 116 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm25817-201ENSMUST00000177758 121 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm24766-201ENSMUST00000179182 121 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm43814-201ENSMUST00000197851 413 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm17829-201ENSMUST00000219782 344 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Gm4036-201ENSMUST00000220842 626 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Snora31-201ENSMUST00000083213 130 ntBASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Sh3rf1Q69ZI1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm12335-201ENSMUST00000119738 327 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22320-201ENSMUST00000157149 312 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22120-201ENSMUST00000175590 70 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm27580-201ENSMUST00000183666 149 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm37923-201ENSMUST00000191624 161 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm42774-201ENSMUST00000198854 283 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm44182-201ENSMUST00000204052 115 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm24948-201ENSMUST00000082866 207 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Mir370-201ENSMUST00000083499 79 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm24164-201ENSMUST00000093663 104 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Sh3rf1Q69ZI1 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sh3rf1Q69ZI1 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.81□□□□□ -1.8
Sh3rf1Q69ZI1 Gm6071-201ENSMUST00000119561 440 ntBASIC3.81□□□□□ -1.8
Sh3rf1Q69ZI1 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.81□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22212-201ENSMUST00000158096 106 ntBASIC3.81□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22476-201ENSMUST00000158902 100 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms