Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ift88Q61371 Gm11854-201ENSMUST00000117839 446 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.13□□□□□ -1.91
Ift88Q61371 Gm22113-201ENSMUST00000158343 104 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Gm24487-201ENSMUST00000178017 63 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Gm9830-201ENSMUST00000178509 357 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Gm28825-201ENSMUST00000186233 238 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ift88Q61371 Gm37428-201ENSMUST00000193886 137 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Gm43510-201ENSMUST00000197922 353 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.13□□□□□ -1.91
Ift88Q61371 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ift88Q61371 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ift88Q61371 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ift88Q61371 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ift88Q61371 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ift88Q61371 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ift88Q61371 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.13□□□□□ -1.91
Ift88Q61371 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
Ift88Q61371 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ift88Q61371 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ift88Q61371 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.12□□□□□ -1.91
Ift88Q61371 Gm25466-201ENSMUST00000103995 132 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm12458-201ENSMUST00000119387 495 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm22330-201ENSMUST00000158068 115 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm24056-201ENSMUST00000158617 146 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Snord53-201ENSMUST00000175146 78 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ift88Q61371 Mir6402-201ENSMUST00000183406 80 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Mir6370-201ENSMUST00000183510 120 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm28951-201ENSMUST00000190742 313 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm43355-201ENSMUST00000196541 346 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.12□□□□□ -1.91
Ift88Q61371 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.12□□□□□ -1.91
Ift88Q61371 Gm45616-201ENSMUST00000211711 319 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Gm23297-201ENSMUST00000083184 127 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ift88Q61371 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ift88Q61371 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.12□□□□□ -1.91
Ift88Q61371 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ift88Q61371 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ift88Q61371 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 Gm24835-201ENSMUST00000116777 111 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm9850-201ENSMUST00000117916 227 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm11862-201ENSMUST00000119678 659 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm14883-201ENSMUST00000120179 157 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 Gm23667-201ENSMUST00000157466 120 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm17065-201ENSMUST00000165245 239 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm22448-201ENSMUST00000179254 107 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm20058-201ENSMUST00000186939 284 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 Mir3970-201ENSMUST00000199287 90 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm44425-201ENSMUST00000203739 429 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm44989-201ENSMUST00000204749 217 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.11□□□□□ -1.91
Ift88Q61371 Gm8940-201ENSMUST00000212585 219 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.11□□□□□ -1.91
Ift88Q61371 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.11□□□□□ -1.91
Ift88Q61371 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ift88Q61371 Gm22443-201ENSMUST00000082890 107 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Gm26329-201ENSMUST00000093723 110 ntBASIC3.11□□□□□ -1.91
Ift88Q61371 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ift88Q61371 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ift88Q61371 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ift88Q61371 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 Gm12934-201ENSMUST00000119221 343 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 Gm14069-201ENSMUST00000120815 229 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 Gm15272-201ENSMUST00000120865 233 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 Gm27470-201ENSMUST00000184070 210 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.1□□□□□ -1.91
Ift88Q61371 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.1□□□□□ -1.91
Ift88Q61371 Gm44960-201ENSMUST00000207403 141 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 Gm45687-201ENSMUST00000209454 155 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.1□□□□□ -1.91
Ift88Q61371 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.1□□□□□ -1.91
Ift88Q61371 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ift88Q61371 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ift88Q61371 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ift88Q61371 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ift88Q61371 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Ift88Q61371 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms