Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm7422-201ENSMUST00000220115 640 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm21937-201ENSMUST00000222825 218 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm25202-201ENSMUST00000082838 191 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm26164-201ENSMUST00000083793 104 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CtcfQ61164 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CtcfQ61164 Gm22658-201ENSMUST00000104196 155 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm13153-201ENSMUST00000120969 637 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm12779-201ENSMUST00000121496 143 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm26256-201ENSMUST00000122499 186 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm25808-201ENSMUST00000122784 284 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm22611-201ENSMUST00000158288 150 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm22891-201ENSMUST00000158641 164 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.05□□□□□ -1.92
CtcfQ61164 Gm3027-201ENSMUST00000167579 451 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Snord53-201ENSMUST00000175146 78 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm29553-201ENSMUST00000189692 279 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm6801-201ENSMUST00000190697 339 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm32033-201ENSMUST00000193483 339 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm44419-201ENSMUST00000203338 229 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm33654-201ENSMUST00000221704 215 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Gm9370-201ENSMUST00000222787 609 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.05□□□□□ -1.92
CtcfQ61164 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CtcfQ61164 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CtcfQ61164 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CtcfQ61164 Gm14269-201ENSMUST00000120455 306 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm25945-201ENSMUST00000122484 135 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm22956-201ENSMUST00000122520 80 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.04□□□□□ -1.92
CtcfQ61164 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.04□□□□□ -1.92
CtcfQ61164 Gm24443-201ENSMUST00000157242 132 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm24618-201ENSMUST00000177718 94 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm23953-201ENSMUST00000178214 94 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CtcfQ61164 Gm26332-201ENSMUST00000179813 94 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm22863-201ENSMUST00000180265 94 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm27410-201ENSMUST00000183851 115 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm29352-201ENSMUST00000188054 544 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm43914-201ENSMUST00000203592 594 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.04□□□□□ -1.92
CtcfQ61164 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
CtcfQ61164 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CtcfQ61164 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CtcfQ61164 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.04□□□□□ -1.92
CtcfQ61164 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CtcfQ61164 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CtcfQ61164 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CtcfQ61164 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CtcfQ61164 Gm23422-201ENSMUST00000102000 107 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm11456-201ENSMUST00000121070 256 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm23000-201ENSMUST00000157083 139 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm24729-201ENSMUST00000158225 137 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm23262-201ENSMUST00000158323 168 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm22435-201ENSMUST00000158552 128 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm26024-201ENSMUST00000158657 322 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm22257-201ENSMUST00000158687 301 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CtcfQ61164 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.03□□□□□ -1.92
CtcfQ61164 Gm9830-201ENSMUST00000178509 357 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CtcfQ61164 Gm29429-201ENSMUST00000187071 121 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm37029-201ENSMUST00000195773 239 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm44825-201ENSMUST00000207557 150 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm44598-201ENSMUST00000207566 150 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm45815-201ENSMUST00000220241 146 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Gm22061-201ENSMUST00000082557 107 ntBASIC3.03□□□□□ -1.92
CtcfQ61164 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CtcfQ61164 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CtcfQ61164 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CtcfQ61164 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CtcfQ61164 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CtcfQ61164 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CtcfQ61164 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CtcfQ61164 Gm12646-201ENSMUST00000119144 238 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm11794-201ENSMUST00000119446 237 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm7209-201ENSMUST00000122339 333 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm25373-201ENSMUST00000158156 115 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm8580-201ENSMUST00000160295 464 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm24415-201ENSMUST00000180218 107 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Gm27402-201ENSMUST00000183890 120 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Mir8103-201ENSMUST00000183945 107 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.02□□□□□ -1.93
CtcfQ61164 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms