Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Mir323-201ENSMUST00000083683 86 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm24252-201ENSMUST00000083700 132 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Mir695-201ENSMUST00000102261 109 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm11813-201ENSMUST00000118586 291 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm15659-201ENSMUST00000118881 341 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm15162-201ENSMUST00000119325 283 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm14852-201ENSMUST00000120065 647 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm24385-201ENSMUST00000122694 350 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm23854-201ENSMUST00000158378 108 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm25836-201ENSMUST00000158918 123 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm27245-201ENSMUST00000184385 376 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm28912-201ENSMUST00000189001 234 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm44254-201ENSMUST00000204184 322 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm44865-201ENSMUST00000207240 531 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm18160-201ENSMUST00000214279 827 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm18188-201ENSMUST00000219386 478 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm25578-201ENSMUST00000083406 104 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm23102-201ENSMUST00000083724 116 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.41□□□□□ -2.34
Trav3-1Q5R1I8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
Trav3-1Q5R1I8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Mir1942-201ENSMUST00000157274 63 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm25831-201ENSMUST00000158924 163 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Mir6907-201ENSMUST00000183764 71 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm29134-201ENSMUST00000186579 126 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm28337-201ENSMUST00000190425 666 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm31123-201ENSMUST00000192094 666 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm9236-201ENSMUST00000196892 587 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm43510-201ENSMUST00000197922 353 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.4□□□□□ -2.35
Trav3-1Q5R1I8 Gm22780-201ENSMUST00000104084 132 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm14358-201ENSMUST00000118458 403 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm12825-201ENSMUST00000120249 563 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm26214-201ENSMUST00000158581 107 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm23799-201ENSMUST00000175559 120 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm22264-201ENSMUST00000178200 107 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm26365-201ENSMUST00000179177 94 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Mir6335-201ENSMUST00000184081 98 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm9251-201ENSMUST00000197202 628 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.39□□□□□ -2.35
Trav3-1Q5R1I8 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm11471-201ENSMUST00000121824 198 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm22792-201ENSMUST00000157225 133 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm24388-201ENSMUST00000177872 107 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm26968-201ENSMUST00000182894 481 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm27861-201ENSMUST00000183920 214 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm27959-201ENSMUST00000185172 111 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm45101-201ENSMUST00000208327 232 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm45654-201ENSMUST00000210980 123 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Mir362-201ENSMUST00000093592 65 ntBASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trav3-1Q5R1I8 Gm14600-201ENSMUST00000121032 630 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm11358-201ENSMUST00000122310 373 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm24902-201ENSMUST00000158126 123 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm24394-201ENSMUST00000158141 123 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm17377-201ENSMUST00000165184 207 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm22111-201ENSMUST00000178010 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm23687-201ENSMUST00000178664 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm24566-201ENSMUST00000179286 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm23305-201ENSMUST00000179342 79 ntBASIC0.37□□□□□ -2.35
Trav3-1Q5R1I8 Gm26389-201ENSMUST00000179819 79 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms