Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm22164-201ENSMUST00000158413 106 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm20386-201ENSMUST00000174010 132 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Mir3057-201ENSMUST00000175040 91 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Mir6370-201ENSMUST00000183510 120 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Mir8116-201ENSMUST00000184134 97 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm38323-201ENSMUST00000192450 210 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm23370-202ENSMUST00000197008 129 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Mir3961-201ENSMUST00000198795 59 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm45387-201ENSMUST00000209792 632 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm31849-201ENSMUST00000220306 375 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Snora41-201ENSMUST00000082668 132 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm26055-201ENSMUST00000083038 107 ntBASIC0.59□□□□□ -2.31
Trav6d-4Q5R1I0 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm13239-201ENSMUST00000119920 637 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm14215-201ENSMUST00000120578 221 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Adgrg4-206ENSMUST00000168724 531 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm27640-201ENSMUST00000184580 147 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm28862-201ENSMUST00000188246 163 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm43955-201ENSMUST00000204332 142 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm44446-201ENSMUST00000204864 255 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm26226-201ENSMUST00000082509 116 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Snord96a-201ENSMUST00000082791 81 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm24928-201ENSMUST00000083399 107 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Mir10b-201ENSMUST00000083566 68 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm25897-201ENSMUST00000083709 107 ntBASIC0.58□□□□□ -2.32
Trav6d-4Q5R1I0 Gm13885-201ENSMUST00000117569 187 ntBASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 Gm14554-201ENSMUST00000119548 661 ntBASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 Gm22247-201ENSMUST00000082476 131 ntBASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.57□□□□□ -2.32
Trav6d-4Q5R1I0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm22544-201ENSMUST00000104349 127 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm22149-201ENSMUST00000104442 136 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm23991-201ENSMUST00000117033 93 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm15861-201ENSMUST00000120979 339 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm6660-201ENSMUST00000179149 468 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm27028-201ENSMUST00000182303 399 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm27245-201ENSMUST00000184385 376 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Mir6388-201ENSMUST00000184417 75 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Mir6985-201ENSMUST00000184641 61 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm38113-201ENSMUST00000193704 201 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm37002-201ENSMUST00000194560 373 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm44458-201ENSMUST00000196594 143 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm44910-201ENSMUST00000208451 396 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm10092-201ENSMUST00000077110 180 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm24920-201ENSMUST00000083018 85 ntBASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trav6d-4Q5R1I0 Gm11248-201ENSMUST00000119568 201 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm9001-201ENSMUST00000121642 399 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm16038-201ENSMUST00000159317 193 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm3025-201ENSMUST00000163454 489 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm3111-201ENSMUST00000167426 490 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm24323-201ENSMUST00000175342 77 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm18415-201ENSMUST00000177464 647 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm27271-201ENSMUST00000183509 170 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm44391-201ENSMUST00000198490 93 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm44564-201ENSMUST00000207985 180 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm21089-201ENSMUST00000215843 325 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm18774-201ENSMUST00000218269 601 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm10298-201ENSMUST00000074801 265 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Trav6d-4Q5R1I0 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Trav6d-4Q5R1I0 Gm22075-201ENSMUST00000158599 192 ntBASIC0.54□□□□□ -2.32
Trav6d-4Q5R1I0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.54□□□□□ -2.32
Trav6d-4Q5R1I0 Gm25020-201ENSMUST00000178071 107 ntBASIC0.54□□□□□ -2.32
Trav6d-4Q5R1I0 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.54□□□□□ -2.32
Trav6d-4Q5R1I0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav6d-4Q5R1I0 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms