Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm16218-201ENSMUST00000155424 388 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm23983-201ENSMUST00000157142 114 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm25115-201ENSMUST00000157187 140 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm24241-201ENSMUST00000157787 145 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm25863-201ENSMUST00000158249 329 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm25413-201ENSMUST00000158544 312 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Mir3086-201ENSMUST00000175072 87 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Snord87-201ENSMUST00000175437 87 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm21827-201ENSMUST00000178247 423 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Mir6355-201ENSMUST00000183687 106 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Mir6916-201ENSMUST00000184514 63 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm28404-201ENSMUST00000190242 453 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm18775-201ENSMUST00000190763 586 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm7837-201ENSMUST00000190873 412 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm43582-201ENSMUST00000196149 343 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm43083-201ENSMUST00000199594 476 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm44923-201ENSMUST00000206673 85 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm2829-201ENSMUST00000213121 499 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm26175-201ENSMUST00000083794 131 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm26384-201ENSMUST00000102183 110 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm14624-201ENSMUST00000117746 192 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm12370-201ENSMUST00000117809 604 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm11363-201ENSMUST00000121672 548 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm23124-201ENSMUST00000157650 107 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm24419-201ENSMUST00000157875 332 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm7925-201ENSMUST00000166690 401 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Mir6341-201ENSMUST00000183490 121 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm42960-201ENSMUST00000202160 241 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Gm17990-201ENSMUST00000211728 553 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.4□□□□□ -2.19
Trav3-3Q5R1C3 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm15365-201ENSMUST00000122392 300 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm22338-201ENSMUST00000157715 129 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm24962-201ENSMUST00000157917 109 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm22159-201ENSMUST00000158412 130 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm25162-201ENSMUST00000158906 159 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Mir7047-201ENSMUST00000184595 64 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm37923-201ENSMUST00000191624 161 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm2676-201ENSMUST00000207279 606 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm25813-201ENSMUST00000082748 191 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm22572-201ENSMUST00000082985 105 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Gm10360-201ENSMUST00000097219 272 ntBASIC1.39□□□□□ -2.19
Trav3-3Q5R1C3 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm25407-201ENSMUST00000104102 134 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm25109-201ENSMUST00000122474 114 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm23331-201ENSMUST00000157423 108 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm23317-201ENSMUST00000157999 129 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm27490-201ENSMUST00000184754 128 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm44482-201ENSMUST00000199232 103 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm22299-201ENSMUST00000082663 136 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm24817-201ENSMUST00000093672 105 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.38□□□□□ -2.19
Trav3-3Q5R1C3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms