Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14765-201ENSMUST00000121954 326 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm22236-201ENSMUST00000157093 106 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm22217-201ENSMUST00000157556 313 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm25888-201ENSMUST00000157778 302 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm25557-201ENSMUST00000158084 315 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm2855-201ENSMUST00000166765 456 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm18356-201ENSMUST00000185677 623 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm44395-201ENSMUST00000197056 153 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm43676-201ENSMUST00000197532 540 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm17991-201ENSMUST00000208139 297 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm23429-201ENSMUST00000122486 149 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm26102-201ENSMUST00000157251 284 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm23230-201ENSMUST00000157298 133 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm16588-201ENSMUST00000162889 355 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm22633-201ENSMUST00000179834 107 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm9022-202ENSMUST00000183285 483 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Mir7241-201ENSMUST00000184532 64 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.6□□□□□ -2.15
Upf3bQ3ULL6 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Mir687-201ENSMUST00000102166 89 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm11854-201ENSMUST00000117839 446 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm22597-201ENSMUST00000157602 80 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm23558-201ENSMUST00000157823 80 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm25457-201ENSMUST00000179509 107 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm21978-201ENSMUST00000179696 377 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm29950-201ENSMUST00000195273 237 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm18774-201ENSMUST00000218269 601 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Upf3bQ3ULL6 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Upf3bQ3ULL6 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.59□□□□□ -2.16
Upf3bQ3ULL6 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Mir301b-201ENSMUST00000102333 97 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm14835-201ENSMUST00000119039 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm22338-201ENSMUST00000157715 129 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm25012-201ENSMUST00000158396 164 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm22076-201ENSMUST00000158601 84 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm23568-201ENSMUST00000177960 92 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm24168-201ENSMUST00000178825 107 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm24829-201ENSMUST00000179245 92 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm28560-201ENSMUST00000186091 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm28334-201ENSMUST00000186653 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm28495-201ENSMUST00000188452 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm28232-201ENSMUST00000188683 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm28481-201ENSMUST00000189231 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm29059-201ENSMUST00000191534 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm37765-201ENSMUST00000192395 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm37237-201ENSMUST00000192893 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm36968-201ENSMUST00000193737 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm38290-201ENSMUST00000195238 315 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Gm33866-201ENSMUST00000196911 289 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
Upf3bQ3ULL6 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm381-201ENSMUST00000117443 2037 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm25317-201ENSMUST00000116824 129 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm14882-201ENSMUST00000117216 218 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm13368-201ENSMUST00000122443 430 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm25625-201ENSMUST00000157221 96 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm22556-201ENSMUST00000157803 100 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Snord87-201ENSMUST00000175437 87 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm24638-201ENSMUST00000179807 132 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm24306-201ENSMUST00000180229 79 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm44962-201ENSMUST00000206460 279 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Gm25698-201ENSMUST00000082897 107 ntBASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Upf3bQ3ULL6 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm25992-201ENSMUST00000102437 109 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms