Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm22115-201ENSMUST00000103976 133 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm23923-201ENSMUST00000104108 133 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm23713-201ENSMUST00000157353 70 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm23277-201ENSMUST00000157914 136 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm23666-201ENSMUST00000158053 116 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm22615-201ENSMUST00000158102 70 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Mir1934-201ENSMUST00000158127 83 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm23860-201ENSMUST00000179446 132 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm27285-201ENSMUST00000183875 127 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm17966-201ENSMUST00000193453 594 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Gm18341-201ENSMUST00000197538 622 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.25□□□□□ -1.73
Limch1Q3UH68 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Limch1Q3UH68 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Limch1Q3UH68 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Limch1Q3UH68 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm12276-201ENSMUST00000121709 301 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm23667-201ENSMUST00000157466 120 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm22380-201ENSMUST00000157479 95 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm22217-201ENSMUST00000157556 313 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Mir1967-201ENSMUST00000157789 82 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm20399-201ENSMUST00000174652 132 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm43749-201ENSMUST00000199345 352 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm36189-201ENSMUST00000204113 523 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Snord15a-201ENSMUST00000083888 148 ntBASIC4.24□□□□□ -1.73
Limch1Q3UH68 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Limch1Q3UH68 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm22590-201ENSMUST00000104247 128 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm22497-201ENSMUST00000104499 131 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Mdga2-203ENSMUST00000113942 423 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm15936-201ENSMUST00000118706 460 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm11704-201ENSMUST00000120031 214 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm22537-201ENSMUST00000158172 199 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm17166-201ENSMUST00000172006 431 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm6660-201ENSMUST00000179149 468 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm5358-201ENSMUST00000212814 353 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm26454-201ENSMUST00000082682 107 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm24204-201ENSMUST00000082950 107 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm23453-201ENSMUST00000083326 106 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Gm25581-201ENSMUST00000083410 164 ntBASIC4.23□□□□□ -1.73
Limch1Q3UH68 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Limch1Q3UH68 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Limch1Q3UH68 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm26387-201ENSMUST00000104238 132 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm13076-201ENSMUST00000118041 204 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm13868-201ENSMUST00000122411 294 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Limch1Q3UH68 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm27761-201ENSMUST00000184091 131 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm37698-201ENSMUST00000192605 463 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm44343-201ENSMUST00000196702 90 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm44355-201ENSMUST00000200417 104 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.22□□□□□ -1.73
Limch1Q3UH68 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Limch1Q3UH68 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms