Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm26585-201ENSMUST00000180890 630 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Mir6371-201ENSMUST00000184470 111 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm18357-201ENSMUST00000188184 580 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm43600-201ENSMUST00000202134 223 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm34314-201ENSMUST00000203622 367 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm45365-201ENSMUST00000209489 256 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm22247-201ENSMUST00000082476 131 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm22806-201ENSMUST00000082738 136 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm25698-201ENSMUST00000082897 107 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm22353-201ENSMUST00000083918 136 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm26329-201ENSMUST00000093723 110 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rnf180Q3U827 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm25377-201ENSMUST00000104334 129 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm13880-201ENSMUST00000118421 474 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm14551-201ENSMUST00000120802 256 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm24729-201ENSMUST00000158225 137 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm22113-201ENSMUST00000158343 104 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm25162-201ENSMUST00000158906 159 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Mir6355-201ENSMUST00000183687 106 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm27521-201ENSMUST00000184022 64 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm37801-201ENSMUST00000194754 274 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm45678-201ENSMUST00000210509 295 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm23454-201ENSMUST00000083332 133 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm23041-201ENSMUST00000083868 106 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Rnf180Q3U827 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.79□□□□□ -1.8
Rnf180Q3U827 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm15377-201ENSMUST00000119594 246 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm26256-201ENSMUST00000122499 186 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm25054-201ENSMUST00000157370 97 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm6374-201ENSMUST00000159051 788 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm20660-201ENSMUST00000177515 289 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm27535-201ENSMUST00000183814 157 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm27921-201ENSMUST00000183968 108 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm20257-202ENSMUST00000188643 130 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm26457-201ENSMUST00000082678 78 ntBASIC3.78□□□□□ -1.8
Rnf180Q3U827 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Rnf180Q3U827 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rnf180Q3U827 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
Rnf180Q3U827 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Mir875-201ENSMUST00000104698 78 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm26247-201ENSMUST00000116702 91 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm14586-201ENSMUST00000119571 408 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm8244-201ENSMUST00000121254 264 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm15213-201ENSMUST00000122098 216 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm24443-201ENSMUST00000157242 132 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm16289-201ENSMUST00000162079 183 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm27997-201ENSMUST00000184942 69 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm35931-201ENSMUST00000203931 448 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm18000-201ENSMUST00000212153 800 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm25581-201ENSMUST00000083410 164 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.77□□□□□ -1.81
Rnf180Q3U827 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Rnf180Q3U827 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm25565-201ENSMUST00000104605 105 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm25316-201ENSMUST00000116826 118 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm12782-201ENSMUST00000117519 727 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm12646-201ENSMUST00000119144 238 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm13424-201ENSMUST00000122301 354 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm23048-201ENSMUST00000157237 129 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm27579-201ENSMUST00000158113 63 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm22389-201ENSMUST00000158193 301 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm2077-201ENSMUST00000195017 319 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm6615-201ENSMUST00000199426 631 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm43415-201ENSMUST00000201934 750 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm44520-201ENSMUST00000205447 802 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm9377-201ENSMUST00000207227 623 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm10222-201ENSMUST00000088336 294 ntBASIC3.76□□□□□ -1.81
Rnf180Q3U827 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms