Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm8840-201ENSMUST00000122454 386 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm22538-201ENSMUST00000158169 299 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm17528-201ENSMUST00000171026 239 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm29014-201ENSMUST00000191422 326 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm44324-201ENSMUST00000198517 135 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm10343-201ENSMUST00000096279 348 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm24068-201ENSMUST00000104513 132 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Mir881-201ENSMUST00000104844 78 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm12954-201ENSMUST00000118610 611 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm26277-201ENSMUST00000157097 152 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm26061-201ENSMUST00000175584 108 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm26928-201ENSMUST00000182674 572 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Mir6372-201ENSMUST00000185114 109 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm28358-202ENSMUST00000189292 223 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm37428-201ENSMUST00000193886 137 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm25203-202ENSMUST00000200458 216 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm44208-201ENSMUST00000205199 421 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm44881-201ENSMUST00000205425 367 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm22061-201ENSMUST00000082557 107 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm25203-201ENSMUST00000082842 215 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm23650-201ENSMUST00000083355 70 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.94□□□□□ -1.94
Col28a1Q2UY11 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm24629-201ENSMUST00000122762 89 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm24630-201ENSMUST00000122768 106 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm23668-201ENSMUST00000157465 111 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm23350-201ENSMUST00000158429 103 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Mir5129-201ENSMUST00000174938 78 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm26195-201ENSMUST00000175035 101 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Mir6336-201ENSMUST00000183581 130 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm27245-201ENSMUST00000184385 376 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm38183-201ENSMUST00000193189 205 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.93□□□□□ -1.94
Col28a1Q2UY11 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm14877-201ENSMUST00000119803 478 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm15466-201ENSMUST00000122299 333 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm13424-201ENSMUST00000122301 354 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm14389-201ENSMUST00000140453 241 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm25637-201ENSMUST00000157529 107 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm22328-201ENSMUST00000158074 112 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm7582-201ENSMUST00000160831 603 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm16111-201ENSMUST00000162128 285 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm23921-201ENSMUST00000175258 107 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm27928-201ENSMUST00000183747 256 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Mir7014-201ENSMUST00000183853 63 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm29602-201ENSMUST00000186887 442 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm44076-201ENSMUST00000203072 520 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm44473-201ENSMUST00000204039 152 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm23615-201ENSMUST00000082602 65 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Mir10a-201ENSMUST00000083585 110 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col28a1Q2UY11 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
Col28a1Q2UY11 Gm12512-201ENSMUST00000119620 217 ntBASIC2.91□□□□□ -1.94
Col28a1Q2UY11 Gm13273-201ENSMUST00000119737 159 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms