Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox9Q04887 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox9Q04887 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Sox9Q04887 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Gm11065-201ENSMUST00000111462 228 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Gm24914-201ENSMUST00000157285 313 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm23231-201ENSMUST00000157299 104 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm22560-201ENSMUST00000157332 120 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm23586-201ENSMUST00000157657 123 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sox9Q04887 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Gm20651-201ENSMUST00000177219 329 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm7958-201ENSMUST00000178255 468 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm25450-201ENSMUST00000179144 107 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm7950-201ENSMUST00000179633 468 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm27921-201ENSMUST00000183968 108 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm6947-201ENSMUST00000186254 78 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm1833-201ENSMUST00000191608 682 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm37417-201ENSMUST00000195257 454 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sox9Q04887 Snora31-201ENSMUST00000083213 130 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Gm25896-201ENSMUST00000083713 136 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sox9Q04887 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Sox9Q04887 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.6□□□□□ -1.83
Sox9Q04887 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sox9Q04887 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sox9Q04887 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Sox9Q04887 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Sox9Q04887 Gm22674-201ENSMUST00000104413 131 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm12722-201ENSMUST00000118507 493 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm12617-201ENSMUST00000121268 381 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sox9Q04887 Gm24958-201ENSMUST00000158009 97 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm25333-201ENSMUST00000158035 246 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm24084-201ENSMUST00000175173 137 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Mir3965-201ENSMUST00000175570 69 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm22910-201ENSMUST00000178568 132 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm29262-201ENSMUST00000190084 196 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.59□□□□□ -1.83
Sox9Q04887 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm26225-201ENSMUST00000082508 135 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Snord35b-201ENSMUST00000082833 87 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.59□□□□□ -1.83
Sox9Q04887 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sox9Q04887 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Sox9Q04887 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sox9Q04887 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sox9Q04887 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Sox9Q04887 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.59□□□□□ -1.84
Sox9Q04887 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sox9Q04887 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sox9Q04887 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sox9Q04887 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Sox9Q04887 Gm26500-201ENSMUST00000101867 106 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm24683-201ENSMUST00000104840 88 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm9119-201ENSMUST00000118866 495 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm13729-201ENSMUST00000120328 406 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm14389-201ENSMUST00000140453 241 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.58□□□□□ -1.84
Sox9Q04887 Gm22034-201ENSMUST00000157283 134 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm23901-201ENSMUST00000157570 107 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm24997-201ENSMUST00000157910 105 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm22447-201ENSMUST00000158155 92 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.58□□□□□ -1.84
Sox9Q04887 Gm22911-201ENSMUST00000177920 107 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sox9Q04887 Gm27869-201ENSMUST00000184327 122 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm28000-201ENSMUST00000184380 85 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.58□□□□□ -1.84
Sox9Q04887 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm9377-201ENSMUST00000207227 623 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.58□□□□□ -1.84
Sox9Q04887 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm25078-201ENSMUST00000082530 107 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.58□□□□□ -1.84
Sox9Q04887 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Sox9Q04887 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Sox9Q04887 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sox9Q04887 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sox9Q04887 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Sox9Q04887 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox9Q04887 Gm24282-201ENSMUST00000104232 66 ntBASIC3.57□□□□□ -1.84
Sox9Q04887 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Sox9Q04887 Gm23988-201ENSMUST00000117034 122 ntBASIC3.57□□□□□ -1.84
Sox9Q04887 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms