Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11065-201ENSMUST00000111462 228 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm12765-201ENSMUST00000117273 615 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm13714-201ENSMUST00000117313 221 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm26424-201ENSMUST00000122530 104 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm24839-201ENSMUST00000122602 107 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm22733-201ENSMUST00000158094 91 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm24056-201ENSMUST00000158617 146 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm8114-201ENSMUST00000172225 484 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm37000-201ENSMUST00000193058 428 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm43007-201ENSMUST00000197618 291 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm43578-201ENSMUST00000201250 459 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm44449-201ENSMUST00000203610 153 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm44825-201ENSMUST00000207557 150 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm44598-201ENSMUST00000207566 150 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm45365-201ENSMUST00000209489 256 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm46993-201ENSMUST00000220708 259 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm23040-201ENSMUST00000083869 163 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Gm25257-201ENSMUST00000083907 110 ntBASIC1.33□□□□□ -2.2
Nkx3-1P97436 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Nkx3-1P97436 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm15526-201ENSMUST00000112504 204 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm11849-201ENSMUST00000121293 261 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm12639-201ENSMUST00000121400 493 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm14770-201ENSMUST00000122197 312 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm23124-201ENSMUST00000157650 107 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm23558-201ENSMUST00000157823 80 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm24878-201ENSMUST00000158782 104 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm17062-201ENSMUST00000166987 461 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Mir7665-201ENSMUST00000184907 63 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm42739-201ENSMUST00000200687 226 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm44011-201ENSMUST00000203336 394 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm44459-201ENSMUST00000203926 160 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm26446-201ENSMUST00000082455 103 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm22443-201ENSMUST00000082890 107 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Gm25698-201ENSMUST00000082897 107 ntBASIC1.32□□□□□ -2.2
Nkx3-1P97436 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
Nkx3-1P97436 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Nkx3-1P97436 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm22779-201ENSMUST00000104085 107 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm16428-201ENSMUST00000121193 723 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm25784-201ENSMUST00000122524 81 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Mir1942-201ENSMUST00000157274 63 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm23713-201ENSMUST00000157353 70 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm23122-201ENSMUST00000157645 103 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm22615-201ENSMUST00000158102 70 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm23352-201ENSMUST00000158428 64 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm15914-201ENSMUST00000161922 309 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm24168-201ENSMUST00000178825 107 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm27265-201ENSMUST00000183559 77 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm18775-201ENSMUST00000190763 586 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm38154-201ENSMUST00000195444 340 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Mir7215-201ENSMUST00000200383 51 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm42857-201ENSMUST00000200823 339 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm43911-201ENSMUST00000203097 76 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm44524-201ENSMUST00000203899 271 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.31□□□□□ -2.2
Nkx3-1P97436 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Nkx3-1P97436 Mir300-201ENSMUST00000083485 79 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm26166-201ENSMUST00000083788 107 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.31□□□□□ -2.2
Nkx3-1P97436 Gm23336-201ENSMUST00000117023 123 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm11845-201ENSMUST00000117886 327 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm14852-201ENSMUST00000120065 647 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms