Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.04□□□□□ -2.08
Sox3P53784 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.04□□□□□ -2.08
Sox3P53784 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.04□□□□□ -2.08
Sox3P53784 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.04□□□□□ -2.08
Sox3P53784 Gm23517-201ENSMUST00000082830 192 ntBASIC2.04□□□□□ -2.08
Sox3P53784 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.04□□□□□ -2.08
Sox3P53784 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.03□□□□□ -2.08
Sox3P53784 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.03□□□□□ -2.08
Sox3P53784 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Sox3P53784 Gm22709-201ENSMUST00000116893 111 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm12934-201ENSMUST00000119221 343 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm14766-201ENSMUST00000121689 367 ntBASIC2.03□□□□□ -2.08
Sox3P53784 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm26105-201ENSMUST00000157253 190 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm27396-201ENSMUST00000157708 58 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm24997-201ENSMUST00000157910 105 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm23476-201ENSMUST00000158881 274 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm20689-201ENSMUST00000176033 279 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Sox3P53784 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Sox3P53784 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Sox3P53784 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.03□□□□□ -2.08
Sox3P53784 Gm8151-201ENSMUST00000184817 871 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.03□□□□□ -2.08
Sox3P53784 Gm44181-201ENSMUST00000203106 483 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm44870-201ENSMUST00000207291 357 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.03□□□□□ -2.08
Sox3P53784 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Gm22806-201ENSMUST00000082738 136 ntBASIC2.03□□□□□ -2.08
Sox3P53784 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Sox3P53784 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Sox3P53784 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm22151-201ENSMUST00000116963 58 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm14588-201ENSMUST00000119895 172 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm13409-201ENSMUST00000122072 546 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm25488-201ENSMUST00000158728 118 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm27490-201ENSMUST00000184754 128 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm28838-201ENSMUST00000186338 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm29635-201ENSMUST00000187221 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm29026-201ENSMUST00000187787 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm28797-201ENSMUST00000188543 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm28855-201ENSMUST00000188680 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm28705-201ENSMUST00000189548 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm28939-201ENSMUST00000190351 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm28223-201ENSMUST00000190469 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm29092-201ENSMUST00000190768 315 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm37162-201ENSMUST00000191708 551 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.02□□□□□ -2.09
Sox3P53784 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.02□□□□□ -2.09
Sox3P53784 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.02□□□□□ -2.09
Sox3P53784 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.02□□□□□ -2.09
Sox3P53784 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.02□□□□□ -2.09
Sox3P53784 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.02□□□□□ -2.09
Sox3P53784 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.02□□□□□ -2.09
Sox3P53784 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Sox3P53784 Snora69-201ENSMUST00000083708 131 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Gm23040-201ENSMUST00000083869 163 ntBASIC2.02□□□□□ -2.09
Sox3P53784 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Sox3P53784 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Sox3P53784 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Sox3P53784 Mir301b-201ENSMUST00000102333 97 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm15211-201ENSMUST00000118932 528 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm14013-201ENSMUST00000119006 270 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm12872-201ENSMUST00000121835 320 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Mir1942-201ENSMUST00000157274 63 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.01□□□□□ -2.09
Sox3P53784 Gm16561-201ENSMUST00000163001 192 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm23725-201ENSMUST00000177876 107 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm29604-201ENSMUST00000187176 163 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Gm28169-201ENSMUST00000190342 345 ntBASIC2.01□□□□□ -2.09
Sox3P53784 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.01□□□□□ -2.09
Sox3P53784 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.01□□□□□ -2.09
Sox3P53784 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.01□□□□□ -2.09
Sox3P53784 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.01□□□□□ -2.09
Sox3P53784 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Sox3P53784 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2□□□□□ -2.09
Sox3P53784 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2□□□□□ -2.09
Sox3P53784 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2□□□□□ -2.09
Sox3P53784 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2□□□□□ -2.09
Sox3P53784 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Sox3P53784 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Sox3P53784 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2□□□□□ -2.09
Sox3P53784 Gm25961-201ENSMUST00000157174 135 ntBASIC2□□□□□ -2.09
Sox3P53784 Gm23829-201ENSMUST00000157392 270 ntBASIC2□□□□□ -2.09
Sox3P53784 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Sox3P53784 Trbv6-201ENSMUST00000193743 276 ntBASIC2□□□□□ -2.09
Sox3P53784 Gm33354-201ENSMUST00000195448 906 ntBASIC2□□□□□ -2.09
Sox3P53784 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2□□□□□ -2.09
Sox3P53784 Gm43676-201ENSMUST00000197532 540 ntBASIC2□□□□□ -2.09
Sox3P53784 Gm29809-201ENSMUST00000218423 493 ntBASIC2□□□□□ -2.09
Sox3P53784 AC117588.2-201ENSMUST00000228340 311 ntBASIC2□□□□□ -2.09
Sox3P53784 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
Sox3P53784 Gm25698-201ENSMUST00000082897 107 ntBASIC2□□□□□ -2.09
Sox3P53784 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2□□□□□ -2.09
Sox3P53784 Gm43373-201ENSMUST00000202552 2870 ntBASIC2□□□□□ -2.09
Sox3P53784 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms