Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm19620-201ENSMUST00000195972 434 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Gm6842-201ENSMUST00000211361 390 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Gm25930-201ENSMUST00000082785 107 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Gm25480-201ENSMUST00000083217 133 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Gm22973-201ENSMUST00000083298 191 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Snord14d-201ENSMUST00000083424 86 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Gm23731-201ENSMUST00000083749 107 ntBASIC3.59□□□□□ -1.83
Usp4P35123 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Usp4P35123 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp4P35123 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Usp4P35123 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Usp4P35123 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.59□□□□□ -1.84
Usp4P35123 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.59□□□□□ -1.84
Usp4P35123 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.59□□□□□ -1.84
Usp4P35123 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Usp4P35123 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Usp4P35123 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Usp4P35123 Gm23234-201ENSMUST00000157304 134 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm22145-201ENSMUST00000157396 148 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm25720-201ENSMUST00000157503 105 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Mir1934-201ENSMUST00000158127 83 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm23053-201ENSMUST00000175136 96 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.58□□□□□ -1.84
Usp4P35123 Gm37923-201ENSMUST00000191624 161 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.58□□□□□ -1.84
Usp4P35123 Gm35405-201ENSMUST00000218754 400 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm23517-201ENSMUST00000082830 192 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm25651-201ENSMUST00000083782 119 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Usp4P35123 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.58□□□□□ -1.84
Usp4P35123 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp4P35123 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Usp4P35123 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Usp4P35123 Mir541-201ENSMUST00000102097 90 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Usp4P35123 Gm22784-201ENSMUST00000104088 132 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm16005-201ENSMUST00000120515 269 ntBASIC3.57□□□□□ -1.84
Usp4P35123 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm22482-201ENSMUST00000122563 359 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.57□□□□□ -1.84
Usp4P35123 Gm22034-201ENSMUST00000157283 134 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm24008-201ENSMUST00000157733 138 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm24750-201ENSMUST00000157843 104 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Usp4P35123 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm37290-201ENSMUST00000195775 339 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp4P35123 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm45080-201ENSMUST00000206648 283 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm44594-201ENSMUST00000208982 407 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Usp4P35123 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Usp4P35123 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Usp4P35123 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp4P35123 Gm22620-201ENSMUST00000082700 133 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Gm22739-201ENSMUST00000083437 160 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Usp4P35123 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.57□□□□□ -1.84
Usp4P35123 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Usp4P35123 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Usp4P35123 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Usp4P35123 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Usp4P35123 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Usp4P35123 Gm23175-201ENSMUST00000104371 132 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm23653-201ENSMUST00000116751 97 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm13504-201ENSMUST00000117490 316 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm12797-201ENSMUST00000118645 273 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm5762-201ENSMUST00000119204 258 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm14593-201ENSMUST00000119948 294 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm12617-201ENSMUST00000121268 381 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm23640-201ENSMUST00000157860 104 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm24959-201ENSMUST00000157924 146 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm25654-201ENSMUST00000158467 88 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm24086-201ENSMUST00000175171 98 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm24308-201ENSMUST00000177773 114 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm28010-201ENSMUST00000179485 126 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.56□□□□□ -1.84
Usp4P35123 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.56□□□□□ -1.84
Usp4P35123 Gm44519-201ENSMUST00000206486 122 ntBASIC3.56□□□□□ -1.84
Usp4P35123 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.56□□□□□ -1.84
Usp4P35123 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.56□□□□□ -1.84
Usp4P35123 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Usp4P35123 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm22957-201ENSMUST00000122511 123 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm22516-201ENSMUST00000158266 124 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm25835-201ENSMUST00000158917 144 ntBASIC3.55□□□□□ -1.84
Usp4P35123 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Usp4P35123 Gm25535-201ENSMUST00000175364 125 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm23860-201ENSMUST00000179446 132 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Usp4P35123 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.55□□□□□ -1.84
Usp4P35123 Gm44322-201ENSMUST00000196830 115 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm44385-201ENSMUST00000198781 81 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm32381-201ENSMUST00000203192 476 ntBASIC3.55□□□□□ -1.84
Usp4P35123 Gm19244-201ENSMUST00000204340 253 ntBASIC3.55□□□□□ -1.84
Usp4P35123 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms