Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25066-201ENSMUST00000158145 123 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Mir3086-201ENSMUST00000175072 87 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Mir6399-201ENSMUST00000184050 84 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm32175-201ENSMUST00000193641 346 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm43431-201ENSMUST00000198577 340 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm44482-201ENSMUST00000199232 103 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Sdc1P18828 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.56□□□□□ -2.16
Sdc1P18828 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Sdc1P18828 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Sdc1P18828 Snord38a-201ENSMUST00000083746 71 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Sdc1P18828 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Sdc1P18828 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Sdc1P18828 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Sdc1P18828 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Sdc1P18828 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Sdc1P18828 Mir1193-201ENSMUST00000116761 121 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm14333-201ENSMUST00000130484 264 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm22386-201ENSMUST00000158192 129 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.55□□□□□ -2.16
Sdc1P18828 Gm24418-201ENSMUST00000177597 79 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm24639-201ENSMUST00000178518 79 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm23076-201ENSMUST00000179082 79 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm25077-201ENSMUST00000179157 79 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
Sdc1P18828 Gm37599-201ENSMUST00000193067 489 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm37869-201ENSMUST00000193385 595 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm44393-201ENSMUST00000197418 138 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm43583-201ENSMUST00000199235 303 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm45366-201ENSMUST00000209828 384 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm2829-201ENSMUST00000213121 499 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.55□□□□□ -2.16
Sdc1P18828 Gm5374-201ENSMUST00000222868 657 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Sdc1P18828 Gm25813-201ENSMUST00000082748 191 ntBASIC1.55□□□□□ -2.16
Sdc1P18828 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc1P18828 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc1P18828 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc1P18828 Gm15010-201ENSMUST00000117153 407 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm15365-201ENSMUST00000122392 300 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm26424-201ENSMUST00000122530 104 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm24892-201ENSMUST00000122747 104 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm23983-201ENSMUST00000157142 114 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm24481-201ENSMUST00000157210 102 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm24010-201ENSMUST00000157731 282 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc1P18828 Mir6341-201ENSMUST00000183490 121 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Mir6355-201ENSMUST00000183687 106 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm27532-201ENSMUST00000183726 113 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm29134-201ENSMUST00000186579 126 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm6445-201ENSMUST00000189515 1112 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm28337-201ENSMUST00000190425 666 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm18775-201ENSMUST00000190763 586 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm31123-201ENSMUST00000192094 666 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm37641-201ENSMUST00000193837 239 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.54□□□□□ -2.16
Sdc1P18828 Gm44881-201ENSMUST00000205425 367 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc1P18828 Gm22997-201ENSMUST00000082845 107 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm23093-201ENSMUST00000083450 102 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 Gm22577-201ENSMUST00000083731 109 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Sdc1P18828 Gm10360-201ENSMUST00000097219 272 ntBASIC1.54□□□□□ -2.16
Sdc1P18828 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.54□□□□□ -2.16
Sdc1P18828 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Sdc1P18828 Gm9043-201ENSMUST00000119677 314 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm25115-201ENSMUST00000157187 140 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm22217-201ENSMUST00000157556 313 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm5277-201ENSMUST00000164923 556 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm23725-201ENSMUST00000177876 107 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm26622-201ENSMUST00000180520 298 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Sdc1P18828 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.53□□□□□ -2.16
Sdc1P18828 Gm37923-201ENSMUST00000191624 161 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm38280-201ENSMUST00000192610 158 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.53□□□□□ -2.16
Sdc1P18828 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Sdc1P18828 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.53□□□□□ -2.16
Sdc1P18828 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Sdc1P18828 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.53□□□□□ -2.17
Sdc1P18828 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
Sdc1P18828 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Sdc1P18828 Gm23803-201ENSMUST00000104610 132 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm22603-201ENSMUST00000157603 96 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm23181-201ENSMUST00000158685 110 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms