Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22693-201ENSMUST00000175049 442 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Mir8106-201ENSMUST00000184520 139 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Gm19326-201ENSMUST00000219818 326 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Gm26128-201ENSMUST00000083170 110 ntBASIC0.85□□□□□ -2.27
Col1a1P11087 Gm24002-201ENSMUST00000158456 104 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm25491-201ENSMUST00000158733 308 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm26285-201ENSMUST00000177923 107 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.84□□□□□ -2.28
Col1a1P11087 Gm37771-201ENSMUST00000193121 265 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm37029-201ENSMUST00000195773 239 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm44024-201ENSMUST00000203008 476 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm23622-201ENSMUST00000082460 107 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm25853-201ENSMUST00000082793 132 ntBASIC0.84□□□□□ -2.28
Col1a1P11087 Gm2348-201ENSMUST00000108782 300 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm23713-201ENSMUST00000157353 70 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm22615-201ENSMUST00000158102 70 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Col1a1P11087 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm24417-201ENSMUST00000178123 79 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm24653-201ENSMUST00000178541 79 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm25934-201ENSMUST00000178642 79 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm29231-201ENSMUST00000179850 319 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.83□□□□□ -2.28
Col1a1P11087 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Gm18410-201ENSMUST00000207199 577 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Col1a1P11087 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Col1a1P11087 Gm24258-201ENSMUST00000083739 133 ntBASIC0.83□□□□□ -2.28
Col1a1P11087 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Col1a1P11087 Gm44708-201ENSMUST00000205580 2237 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm14980-201ENSMUST00000121247 736 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm22163-201ENSMUST00000158408 135 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm42807-201ENSMUST00000200141 329 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.82□□□□□ -2.28
Col1a1P11087 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.82□□□□□ -2.28
Col1a1P11087 Gm31849-201ENSMUST00000220306 375 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Col1a1P11087 Gm23245-201ENSMUST00000083370 135 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm25411-201ENSMUST00000083760 151 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.82□□□□□ -2.28
Col1a1P11087 Mir653-201ENSMUST00000102402 85 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm23907-201ENSMUST00000104595 189 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm14629-201ENSMUST00000122428 144 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.81□□□□□ -2.28
Col1a1P11087 Gm23605-201ENSMUST00000157255 127 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm22447-201ENSMUST00000158155 92 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.81□□□□□ -2.28
Col1a1P11087 Gm27878-201ENSMUST00000184000 106 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Col1a1P11087 Gm23100-201ENSMUST00000083455 141 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Mir101a-201ENSMUST00000083517 83 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm25683-201ENSMUST00000083940 131 ntBASIC0.81□□□□□ -2.28
Col1a1P11087 Gm11845-201ENSMUST00000117886 327 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm14039-201ENSMUST00000118705 101 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm14669-201ENSMUST00000118841 250 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm25333-201ENSMUST00000158035 246 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm22088-201ENSMUST00000158341 117 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm16038-201ENSMUST00000159317 193 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm18415-201ENSMUST00000177464 647 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm19891-201ENSMUST00000189771 303 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm37098-201ENSMUST00000192290 244 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm38060-201ENSMUST00000194822 464 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm29950-201ENSMUST00000195273 237 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm44300-201ENSMUST00000196792 121 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.8□□□□□ -2.28
Col1a1P11087 Gm45207-201ENSMUST00000207469 145 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm18268-201ENSMUST00000208445 943 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm45616-201ENSMUST00000211711 319 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm45730-201ENSMUST00000212560 395 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.8□□□□□ -2.28
Col1a1P11087 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Col1a1P11087 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.8□□□□□ -2.28
Col1a1P11087 Gm22443-201ENSMUST00000082890 107 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col1a1P11087 Gm26000-201ENSMUST00000157991 107 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Mir3086-201ENSMUST00000175072 87 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm24333-201ENSMUST00000175101 84 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm21754-201ENSMUST00000177550 479 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Col1a1P11087 Mir6389-201ENSMUST00000183661 102 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Col1a1P11087 Gm44050-201ENSMUST00000204263 527 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm45247-201ENSMUST00000210757 309 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Gm21937-201ENSMUST00000222825 218 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms