Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm14670-201ENSMUST00000117327 337 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm14657-201ENSMUST00000117461 302 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm11693-201ENSMUST00000119625 565 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm14638-201ENSMUST00000121338 216 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm13368-201ENSMUST00000122443 430 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm23887-201ENSMUST00000122683 172 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm23716-201ENSMUST00000157348 144 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm24810-201ENSMUST00000175317 70 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col4a1P02463 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col4a1P02463 Gm27490-201ENSMUST00000184754 128 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm28744-201ENSMUST00000189939 340 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm37399-201ENSMUST00000195224 416 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm33354-201ENSMUST00000195448 906 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm5322-201ENSMUST00000206142 699 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm45402-201ENSMUST00000211796 223 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm20102-201ENSMUST00000222445 220 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Col4a1P02463 Gm26056-201ENSMUST00000083043 104 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Gm24045-201ENSMUST00000083113 98 ntBASIC2.06□□□□□ -2.08
Col4a1P02463 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col4a1P02463 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col4a1P02463 Gm22831-201ENSMUST00000102473 109 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Mir669i-201ENSMUST00000117007 127 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm15896-201ENSMUST00000118045 440 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm11556-201ENSMUST00000120751 288 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm14765-201ENSMUST00000121954 326 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.05□□□□□ -2.08
Col4a1P02463 Gm23470-201ENSMUST00000157129 120 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm25888-201ENSMUST00000157778 302 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm22434-201ENSMUST00000158549 122 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm24546-201ENSMUST00000158652 102 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm22136-201ENSMUST00000158751 268 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.05□□□□□ -2.08
Col4a1P02463 Gm26195-201ENSMUST00000175035 101 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Gm21673-201ENSMUST00000186640 436 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col4a1P02463 Gm21135-201ENSMUST00000189023 436 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.05□□□□□ -2.08
Col4a1P02463 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col4a1P02463 Gm37899-201ENSMUST00000193116 8717 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Mir301b-201ENSMUST00000102333 97 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Gm11582-201ENSMUST00000121041 236 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Gm14694-201ENSMUST00000121856 282 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col4a1P02463 Mir5129-201ENSMUST00000174938 78 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col4a1P02463 Gm8532-201ENSMUST00000179174 461 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.04□□□□□ -2.08
Col4a1P02463 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col4a1P02463 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.04□□□□□ -2.08
Col4a1P02463 Gm24037-201ENSMUST00000082871 180 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Snord14d-201ENSMUST00000083424 86 ntBASIC2.04□□□□□ -2.08
Col4a1P02463 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col4a1P02463 Gm14307-201ENSMUST00000118930 291 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm11785-201ENSMUST00000120165 601 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm14297-201ENSMUST00000129110 291 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.03□□□□□ -2.08
Col4a1P02463 Gm23016-201ENSMUST00000158431 62 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm38050-201ENSMUST00000191904 238 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.03□□□□□ -2.08
Col4a1P02463 Gm37523-201ENSMUST00000194901 412 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm37431-201ENSMUST00000195102 111 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm43472-201ENSMUST00000200175 154 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm45101-201ENSMUST00000208327 232 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col4a1P02463 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col4a1P02463 Gm22245-201ENSMUST00000082479 103 ntBASIC2.03□□□□□ -2.08
Col4a1P02463 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col4a1P02463 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.03□□□□□ -2.09
Col4a1P02463 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col4a1P02463 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col4a1P02463 Gm13046-201ENSMUST00000117391 501 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm14537-201ENSMUST00000117464 599 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm2066-201ENSMUST00000118046 389 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm24902-201ENSMUST00000158126 123 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm23024-201ENSMUST00000158770 292 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm17162-201ENSMUST00000168538 473 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col4a1P02463 Mir6338-201ENSMUST00000183389 109 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm27894-201ENSMUST00000184177 92 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm7751-201ENSMUST00000212868 709 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col4a1P02463 Gm23627-201ENSMUST00000082459 107 ntBASIC2.02□□□□□ -2.09
Col4a1P02463 Gm22502-201ENSMUST00000082488 107 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms