Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm24045-201ENSMUST00000083113 98 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Col5a1O88207 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col5a1O88207 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm12368-201ENSMUST00000122251 434 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm4916-201ENSMUST00000126139 642 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm15899-201ENSMUST00000128586 238 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm22521-201ENSMUST00000158272 134 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Nron-204ENSMUST00000158971 370 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Mir5136-201ENSMUST00000175573 76 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm18588-201ENSMUST00000177308 492 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm22851-201ENSMUST00000178741 94 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm25074-201ENSMUST00000178782 94 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm8532-201ENSMUST00000179174 461 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm27660-201ENSMUST00000184028 208 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm29216-201ENSMUST00000187117 492 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm19641-201ENSMUST00000188432 417 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm37281-201ENSMUST00000192412 439 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm43652-201ENSMUST00000196219 675 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm5034-201ENSMUST00000199115 634 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm42475-201ENSMUST00000201212 295 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm44295-201ENSMUST00000203805 437 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.54□□□□□ -2.16
Col5a1O88207 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col5a1O88207 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Col5a1O88207 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm22834-201ENSMUST00000102021 79 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm23987-201ENSMUST00000117039 129 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm12137-201ENSMUST00000119565 346 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm14215-201ENSMUST00000120578 221 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm22836-201ENSMUST00000158441 61 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm26335-201ENSMUST00000178449 107 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm27028-201ENSMUST00000182303 399 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm7909-201ENSMUST00000182688 614 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Mir6341-201ENSMUST00000183490 121 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm28383-201ENSMUST00000187563 139 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.53□□□□□ -2.16
Col5a1O88207 Gm28843-201ENSMUST00000189198 678 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm29262-201ENSMUST00000190084 196 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm18291-201ENSMUST00000190791 301 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm29546-201ENSMUST00000191171 678 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.53□□□□□ -2.16
Col5a1O88207 Gm37119-201ENSMUST00000195691 389 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm44726-201ENSMUST00000203427 217 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm44555-201ENSMUST00000209008 148 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.53□□□□□ -2.16
Col5a1O88207 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Col5a1O88207 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Col5a1O88207 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm22199-201ENSMUST00000122660 126 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm22452-201ENSMUST00000122804 104 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm23124-201ENSMUST00000157650 107 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm24572-201ENSMUST00000175505 88 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Mir1954-201ENSMUST00000175595 86 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm19932-201ENSMUST00000177033 313 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm21758-201ENSMUST00000179336 819 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm6651-201ENSMUST00000189471 271 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm31511-201ENSMUST00000193134 657 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm36953-201ENSMUST00000195295 268 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm44476-201ENSMUST00000196225 91 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm8041-201ENSMUST00000199755 616 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm44041-201ENSMUST00000203678 396 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm45438-201ENSMUST00000210242 564 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm31849-201ENSMUST00000220306 375 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms