Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm22485-201ENSMUST00000157990 109 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm22088-201ENSMUST00000158341 117 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm25194-201ENSMUST00000177987 79 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm18296-201ENSMUST00000192475 783 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm43286-201ENSMUST00000197420 424 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm43708-201ENSMUST00000198857 961 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm44794-201ENSMUST00000206550 411 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm45365-201ENSMUST00000209489 256 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm45616-201ENSMUST00000211711 319 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm19709-201ENSMUST00000215403 482 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm31849-201ENSMUST00000220306 375 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Cacna1bO55017 n-R5s79-201ENSMUST00000083071 120 ntBASIC0.92□□□□□ -2.26
Cacna1bO55017 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC0.92□□□□□ -2.26
Cacna1bO55017 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm15177-201ENSMUST00000120491 577 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm15692-201ENSMUST00000152173 352 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm23469-201ENSMUST00000157131 104 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm25454-201ENSMUST00000157947 315 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm22382-201ENSMUST00000158185 130 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm2930-201ENSMUST00000170403 474 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm21726-201ENSMUST00000179654 392 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm27587-201ENSMUST00000185116 163 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm43007-201ENSMUST00000197618 291 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.91□□□□□ -2.26
Cacna1bO55017 AC130222.1-201ENSMUST00000221198 256 ntBASIC0.91□□□□□ -2.26
Cacna1bO55017 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.91□□□□□ -2.26
Cacna1bO55017 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Cacna1bO55017 Gm22543-201ENSMUST00000104347 94 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm22496-201ENSMUST00000104493 88 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Mir873a-201ENSMUST00000104863 77 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm12191-201ENSMUST00000118307 348 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm11219-201ENSMUST00000118565 358 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm2830-201ENSMUST00000140330 385 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm23324-201ENSMUST00000157421 131 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm22098-201ENSMUST00000157930 85 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm24304-201ENSMUST00000177635 107 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm25175-201ENSMUST00000178712 79 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm24264-201ENSMUST00000179835 94 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm28412-201ENSMUST00000187243 177 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm34015-201ENSMUST00000194908 451 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm46103-201ENSMUST00000217614 341 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm9318-201ENSMUST00000222444 438 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm24948-201ENSMUST00000082866 207 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm26203-201ENSMUST00000082911 114 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Gm23040-201ENSMUST00000083869 163 ntBASIC0.9□□□□□ -2.26
Cacna1bO55017 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Cacna1bO55017 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm15067-201ENSMUST00000119534 156 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm13482-201ENSMUST00000119842 254 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm14599-201ENSMUST00000120469 474 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm22452-201ENSMUST00000122804 104 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Snord13-201ENSMUST00000157627 104 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm22535-201ENSMUST00000158174 119 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm3027-201ENSMUST00000167579 451 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Mir3109-201ENSMUST00000175301 88 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm9830-201ENSMUST00000178509 357 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm37557-201ENSMUST00000191640 139 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
Cacna1bO55017 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.9□□□□□ -2.27
Cacna1bO55017 Gm24412-201ENSMUST00000083426 109 ntBASIC0.9□□□□□ -2.27
Cacna1bO55017 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm23332-201ENSMUST00000157424 275 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm25994-201ENSMUST00000175392 101 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm43171-201ENSMUST00000199882 291 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm44024-201ENSMUST00000203008 476 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm43955-201ENSMUST00000204332 142 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.89□□□□□ -2.27
Cacna1bO55017 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm24049-201ENSMUST00000102409 100 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm14358-201ENSMUST00000118458 403 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm17061-201ENSMUST00000163167 499 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC0.89□□□□□ -2.27
Cacna1bO55017 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm21064-202ENSMUST00000190583 278 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm33354-201ENSMUST00000195448 906 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm31520-201ENSMUST00000203048 733 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 Gm44041-201ENSMUST00000203678 396 ntBASIC0.89□□□□□ -2.27
Cacna1bO55017 AC163289.1-201ENSMUST00000215919 262 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms