Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.93□□□□□ -2.26
Hmgb3O54879 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Hmgb3O54879 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.93□□□□□ -2.26
Hmgb3O54879 Snord14a-201ENSMUST00000082807 87 ntBASIC0.93□□□□□ -2.26
Hmgb3O54879 Gm23848-201ENSMUST00000083826 106 ntBASIC0.93□□□□□ -2.26
Hmgb3O54879 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.93□□□□□ -2.26
Hmgb3O54879 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.93□□□□□ -2.26
Hmgb3O54879 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Hmgb3O54879 Gm24997-201ENSMUST00000157910 105 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm22765-201ENSMUST00000158371 128 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm22075-201ENSMUST00000158599 192 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Mir28b-201ENSMUST00000175399 80 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Mir7675-201ENSMUST00000184262 58 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm27959-201ENSMUST00000185172 111 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm43583-201ENSMUST00000199235 303 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm43199-201ENSMUST00000200019 307 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm19441-201ENSMUST00000221545 330 ntBASIC0.92□□□□□ -2.26
Hmgb3O54879 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Hmgb3O54879 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm2768-201ENSMUST00000121062 250 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm8121-201ENSMUST00000153583 499 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm26102-201ENSMUST00000157251 284 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm26213-201ENSMUST00000158582 110 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Mir3964-201ENSMUST00000174898 74 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm28196-201ENSMUST00000187719 640 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm37081-201ENSMUST00000192034 196 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm42925-201ENSMUST00000197359 285 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm43510-201ENSMUST00000197922 353 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm44609-201ENSMUST00000207157 460 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.91□□□□□ -2.26
Hmgb3O54879 Gm22723-201ENSMUST00000083820 129 ntBASIC0.91□□□□□ -2.26
Hmgb3O54879 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Hmgb3O54879 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Hmgb3O54879 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Hmgb3O54879 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm14882-201ENSMUST00000117216 218 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm14554-201ENSMUST00000119548 661 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm14126-201ENSMUST00000122345 395 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm25325-201ENSMUST00000122559 86 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm23206-201ENSMUST00000122720 184 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm24885-201ENSMUST00000158783 270 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm22129-201ENSMUST00000179034 107 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm16399-201ENSMUST00000181423 219 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm45296-201ENSMUST00000209625 205 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm45366-201ENSMUST00000209828 384 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm45654-201ENSMUST00000210980 123 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Gm35558-202ENSMUST00000221819 499 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Mir19a-201ENSMUST00000083482 82 ntBASIC0.9□□□□□ -2.27
Hmgb3O54879 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC0.9□□□□□ -2.27
Hmgb3O54879 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Hmgb3O54879 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Hmgb3O54879 Gm23336-201ENSMUST00000117023 123 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Gm25423-201ENSMUST00000157609 107 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Gm24777-201ENSMUST00000157644 107 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Hmgb3O54879 Mir7063-201ENSMUST00000184158 91 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Mir6380-201ENSMUST00000184334 81 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Mir6419-201ENSMUST00000184784 113 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Hmgb3O54879 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.89□□□□□ -2.27
Hmgb3O54879 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.89□□□□□ -2.27
Hmgb3O54879 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Hmgb3O54879 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.89□□□□□ -2.27
Hmgb3O54879 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Hmgb3O54879 Gm14972-201ENSMUST00000121780 364 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm23048-201ENSMUST00000157237 129 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm4076-201ENSMUST00000179230 965 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm27640-201ENSMUST00000184580 147 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm45907-201ENSMUST00000213023 193 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.88□□□□□ -2.27
Hmgb3O54879 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Hmgb3O54879 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.87□□□□□ -2.27
Hmgb3O54879 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Hmgb3O54879 Gm22544-201ENSMUST00000104349 127 ntBASIC0.87□□□□□ -2.27
Hmgb3O54879 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms