Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm22595-201ENSMUST00000104250 130 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm6587-201ENSMUST00000120219 613 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.38□□□□□ -2.35
Abca4O35600 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Abca4O35600 Gm28755-201ENSMUST00000185773 199 ntBASIC0.38□□□□□ -2.35
Abca4O35600 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Abca4O35600 Gm42958-201ENSMUST00000197595 318 ntBASIC0.38□□□□□ -2.35
Abca4O35600 n-R5s50-201ENSMUST00000083168 111 ntBASIC0.38□□□□□ -2.35
Abca4O35600 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Gm22114-201ENSMUST00000177756 107 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.37□□□□□ -2.35
Abca4O35600 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.37□□□□□ -2.35
Abca4O35600 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Abca4O35600 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Abca4O35600 Gm22061-201ENSMUST00000082557 107 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Gm23690-201ENSMUST00000083036 94 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Snord32a-201ENSMUST00000083285 83 ntBASIC0.37□□□□□ -2.35
Abca4O35600 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Abca4O35600 Mir710-201ENSMUST00000102088 110 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Gm20698-201ENSMUST00000175657 233 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.37□□□□□ -2.35
Abca4O35600 Gm44482-201ENSMUST00000199232 103 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Mir1291-201ENSMUST00000199842 117 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Gm10264-201ENSMUST00000220589 429 ntBASIC0.37□□□□□ -2.35
Abca4O35600 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Abca4O35600 Gm14903-201ENSMUST00000122435 537 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Gm24060-201ENSMUST00000157494 95 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Mir5129-201ENSMUST00000174938 78 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Abca4O35600 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Abca4O35600 Gm19147-201ENSMUST00000199622 652 ntBASIC0.36□□□□□ -2.35
Abca4O35600 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.36□□□□□ -2.35
Abca4O35600 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.36□□□□□ -2.35
Abca4O35600 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.36□□□□□ -2.35
Abca4O35600 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Abca4O35600 Gm11845-201ENSMUST00000117886 327 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Gm11252-201ENSMUST00000120572 939 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.36□□□□□ -2.35
Abca4O35600 Gm25333-201ENSMUST00000158035 246 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.36□□□□□ -2.35
Abca4O35600 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Abca4O35600 Gm16399-201ENSMUST00000181423 219 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Trbv24-201ENSMUST00000194614 347 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Gm43493-201ENSMUST00000199837 202 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Abca4O35600 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Abca4O35600 Gm24018-201ENSMUST00000083232 107 ntBASIC0.36□□□□□ -2.35
Abca4O35600 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Abca4O35600 Mir653-201ENSMUST00000102402 85 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm13672-201ENSMUST00000117554 459 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Abca4O35600 Gm24020-201ENSMUST00000180156 108 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Mir6338-201ENSMUST00000183389 109 ntBASIC0.35□□□□□ -2.35
Abca4O35600 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Abca4O35600 Ighv1-6-201ENSMUST00000193849 293 ntBASIC0.35□□□□□ -2.35
Abca4O35600 AC127302.1-201ENSMUST00000215973 1111 ntBASIC0.35□□□□□ -2.35
Abca4O35600 AC126043.1-201ENSMUST00000221304 1141 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.35□□□□□ -2.35
Abca4O35600 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm22302-201ENSMUST00000082657 106 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm25711-201ENSMUST00000158633 128 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.35□□□□□ -2.35
Abca4O35600 Mir6915-201ENSMUST00000198839 69 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Abca4O35600 Gm44909-201ENSMUST00000208756 165 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm22293-201ENSMUST00000083314 109 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm25128-201ENSMUST00000083339 76 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Mir216a-201ENSMUST00000083605 72 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Mir29c-201ENSMUST00000083614 88 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm24256-201ENSMUST00000083696 84 ntBASIC0.35□□□□□ -2.35
Abca4O35600 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.34□□□□□ -2.35
Abca4O35600 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Abca4O35600 Gm12636-201ENSMUST00000117395 624 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm24908-201ENSMUST00000157294 127 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm24959-201ENSMUST00000157924 146 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Mir5101-201ENSMUST00000175181 83 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm27402-201ENSMUST00000183890 120 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Mir7675-201ENSMUST00000184262 58 ntBASIC0.34□□□□□ -2.36
Abca4O35600 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Abca4O35600 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.34□□□□□ -2.36
Abca4O35600 Gm34139-201ENSMUST00000196166 294 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm43245-201ENSMUST00000197603 468 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm44024-201ENSMUST00000203008 476 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Abca4O35600 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.34□□□□□ -2.36
Abca4O35600 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
Abca4O35600 Gm16400-201ENSMUST00000116523 1029 ntBASIC0.33□□□□□ -2.36
Abca4O35600 Gm24086-201ENSMUST00000175171 98 ntBASIC0.33□□□□□ -2.36
Abca4O35600 Gm29647-201ENSMUST00000188795 666 ntBASIC0.33□□□□□ -2.36
Abca4O35600 Gm28504-201ENSMUST00000190977 666 ntBASIC0.33□□□□□ -2.36
Abca4O35600 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.33□□□□□ -2.36
Abca4O35600 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.33□□□□□ -2.36
Abca4O35600 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms