Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24028-201ENSMUST00000178991 124 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm27220-201ENSMUST00000183453 262 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm43220-201ENSMUST00000199299 282 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm43749-201ENSMUST00000199345 352 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm44099-201ENSMUST00000203299 112 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm17829-201ENSMUST00000219782 344 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm5548-201ENSMUST00000055878 397 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Pcdh1F7BJK1 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm6829-201ENSMUST00000119858 360 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm14775-201ENSMUST00000122089 310 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm23234-201ENSMUST00000157304 134 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm23584-201ENSMUST00000157655 129 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm27285-201ENSMUST00000183875 127 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm43604-201ENSMUST00000199799 705 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm44859-201ENSMUST00000207831 94 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm45778-201ENSMUST00000211959 153 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Gm46993-201ENSMUST00000220708 259 ntBASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Pcdh1F7BJK1 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm14803-201ENSMUST00000117163 361 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm25269-201ENSMUST00000122601 104 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm22316-201ENSMUST00000158012 216 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm24676-201ENSMUST00000158758 75 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Mir6345-201ENSMUST00000184286 128 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm27760-201ENSMUST00000185048 114 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm43680-201ENSMUST00000199466 340 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Gm20144-201ENSMUST00000203031 165 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdh1F7BJK1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm22269-201ENSMUST00000104002 130 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm12934-201ENSMUST00000119221 343 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm22217-201ENSMUST00000157556 313 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm25224-201ENSMUST00000158195 68 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm18429-201ENSMUST00000198707 421 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm24966-201ENSMUST00000082443 79 ntBASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdh1F7BJK1 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm14299-201ENSMUST00000117586 397 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm14402-201ENSMUST00000122217 508 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm22026-201ENSMUST00000122735 281 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm5963-201ENSMUST00000143451 236 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm24244-201ENSMUST00000157317 130 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm25599-201ENSMUST00000157816 103 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm17166-201ENSMUST00000172006 431 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm10067-201ENSMUST00000179462 348 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Trbv6-201ENSMUST00000193743 276 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm7449-201ENSMUST00000194393 663 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm26454-201ENSMUST00000082682 107 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms