Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.22□□□□□ -2.37
Col6a3E9PWQ3 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
Col6a3E9PWQ3 Mir300-201ENSMUST00000083485 79 ntBASIC0.22□□□□□ -2.37
Col6a3E9PWQ3 Mir107-201ENSMUST00000083660 87 ntBASIC0.22□□□□□ -2.37
Col6a3E9PWQ3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.22□□□□□ -2.37
Col6a3E9PWQ3 Gm23167-201ENSMUST00000157155 103 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm23829-201ENSMUST00000157392 270 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm26149-201ENSMUST00000157432 108 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm17085-201ENSMUST00000165425 502 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Mir6399-201ENSMUST00000184050 84 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm45071-201ENSMUST00000205353 571 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 AL662807.1-201ENSMUST00000224183 126 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm25323-201ENSMUST00000122555 103 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm25035-201ENSMUST00000175414 77 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm24464-201ENSMUST00000179697 107 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm43974-201ENSMUST00000205080 684 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm24144-201ENSMUST00000082632 111 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Gm24049-201ENSMUST00000102409 100 ntBASIC0.21□□□□□ -2.38
Col6a3E9PWQ3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Mir669o-201ENSMUST00000103898 96 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm23588-201ENSMUST00000157659 99 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm22483-201ENSMUST00000157986 274 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm27935-201ENSMUST00000183894 79 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 AC153506.2-201ENSMUST00000218051 257 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm24356-201ENSMUST00000082859 106 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm12636-201ENSMUST00000117395 624 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm6956-201ENSMUST00000134724 546 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm44088-201ENSMUST00000204595 237 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm18039-201ENSMUST00000217816 728 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.2□□□□□ -2.38
Col6a3E9PWQ3 Gm12872-201ENSMUST00000121835 320 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm14651-201ENSMUST00000147192 442 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm23713-201ENSMUST00000157353 70 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm22615-201ENSMUST00000158102 70 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm16162-201ENSMUST00000162296 297 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm43096-201ENSMUST00000196173 421 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm25853-201ENSMUST00000082793 132 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm12191-201ENSMUST00000118307 348 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Mir6393-201ENSMUST00000183709 94 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm27640-201ENSMUST00000184580 147 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm29573-201ENSMUST00000190291 919 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm23332-201ENSMUST00000157424 275 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Mir1949-201ENSMUST00000157434 141 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm3025-201ENSMUST00000163454 489 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm3111-201ENSMUST00000167426 490 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm27884-201ENSMUST00000183865 76 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Mir6342-201ENSMUST00000183870 125 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm4921-201ENSMUST00000219804 992 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Mir103-1-201ENSMUST00000083619 86 ntBASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Col6a3E9PWQ3 Gm12771-201ENSMUST00000120246 135 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm25961-201ENSMUST00000157174 135 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm5731-201ENSMUST00000190969 481 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Snord43-201ENSMUST00000199549 108 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm26224-201ENSMUST00000082506 80 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm23100-201ENSMUST00000083455 141 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm23170-201ENSMUST00000157158 106 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm24304-201ENSMUST00000177635 107 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm15214-201ENSMUST00000122155 470 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm22382-201ENSMUST00000158185 130 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Col6a3E9PWQ3 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Traj60-201ENSMUST00000167781 54 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm23053-201ENSMUST00000175136 96 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm21815-201ENSMUST00000178213 664 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms