Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Mir6370-201ENSMUST00000183510 120 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm27588-201ENSMUST00000185096 263 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm5329-201ENSMUST00000186898 463 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm28453-203ENSMUST00000187041 189 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm8940-201ENSMUST00000212585 219 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm25257-201ENSMUST00000083907 110 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Col6a4A2AX52 AC117226.1-201ENSMUST00000221635 3737 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm22496-201ENSMUST00000104493 88 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm13806-201ENSMUST00000117822 325 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm11572-201ENSMUST00000119164 120 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm24333-201ENSMUST00000175101 84 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm25175-201ENSMUST00000178712 79 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Mir6388-201ENSMUST00000184417 75 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a4A2AX52 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a4A2AX52 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Col6a4A2AX52 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm23100-201ENSMUST00000083455 141 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.74□□□□□ -2.29
Col6a4A2AX52 Mir223-201ENSMUST00000102112 110 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm15312-201ENSMUST00000118827 271 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm14748-201ENSMUST00000119819 411 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm15309-201ENSMUST00000121644 240 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 U6.1-201ENSMUST00000157443 101 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm25375-201ENSMUST00000158157 135 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm25711-201ENSMUST00000158633 128 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm17085-201ENSMUST00000165425 502 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm24417-201ENSMUST00000178123 79 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm24653-201ENSMUST00000178541 79 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm25934-201ENSMUST00000178642 79 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a4A2AX52 Mir6904-201ENSMUST00000183443 67 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Mir6411-201ENSMUST00000183556 108 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm27722-201ENSMUST00000183908 76 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.73□□□□□ -2.29
Col6a4A2AX52 AC147560.1-201ENSMUST00000197528 107 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm42672-201ENSMUST00000197821 352 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm19709-201ENSMUST00000215403 482 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm18252-203ENSMUST00000215855 757 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm26128-201ENSMUST00000083170 110 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Mir107-201ENSMUST00000083660 87 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm24865-201ENSMUST00000103246 96 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm12393-201ENSMUST00000117084 848 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm11845-201ENSMUST00000117886 327 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm14835-201ENSMUST00000119039 315 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm22452-201ENSMUST00000122804 104 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm16129-201ENSMUST00000152628 486 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm18416-201ENSMUST00000175635 1003 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Mir7241-201ENSMUST00000184532 64 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm27419-201ENSMUST00000184576 109 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm19891-201ENSMUST00000189771 303 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm45116-201ENSMUST00000207392 275 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Mir208a-201ENSMUST00000083498 83 ntBASIC0.73□□□□□ -2.29
Col6a4A2AX52 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col6a4A2AX52 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm14674-201ENSMUST00000117816 342 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm24836-201ENSMUST00000122609 108 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm24846-201ENSMUST00000158033 108 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm24100-201ENSMUST00000178592 79 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm27342-201ENSMUST00000183530 109 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm27861-201ENSMUST00000183920 214 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm27428-201ENSMUST00000184289 110 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm42807-201ENSMUST00000200141 329 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm45313-201ENSMUST00000210584 178 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm22091-201ENSMUST00000116908 127 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm11359-201ENSMUST00000120039 567 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm26358-201ENSMUST00000158215 97 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm16546-201ENSMUST00000159442 355 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.72□□□□□ -2.29
Col6a4A2AX52 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.72□□□□□ -2.29
Col6a4A2AX52 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.72□□□□□ -2.29
Col6a4A2AX52 AC153964.2-201ENSMUST00000217704 2474 ntBASIC0.71□□□□□ -2.3
Col6a4A2AX52 Gm14731-201ENSMUST00000119216 376 ntBASIC0.71□□□□□ -2.3
Col6a4A2AX52 Gm13903-201ENSMUST00000120945 193 ntBASIC0.71□□□□□ -2.3
Col6a4A2AX52 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.71□□□□□ -2.3
Col6a4A2AX52 Gm23754-201ENSMUST00000157576 63 ntBASIC0.71□□□□□ -2.3
Col6a4A2AX52 Gm24960-201ENSMUST00000157923 90 ntBASIC0.71□□□□□ -2.3
Col6a4A2AX52 Gm25491-201ENSMUST00000158733 308 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms