Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm44300-201ENSMUST00000196792 121 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Mir3068-202ENSMUST00000197755 79 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm45247-201ENSMUST00000210757 309 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm45530-201ENSMUST00000211658 225 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm8125-201ENSMUST00000216602 738 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 AC154603.1-201ENSMUST00000224355 313 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm25377-201ENSMUST00000104334 129 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm13087-201ENSMUST00000118298 256 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm14716-201ENSMUST00000120138 718 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm11389-201ENSMUST00000121407 430 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm23329-201ENSMUST00000157415 108 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm22233-201ENSMUST00000157464 114 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm24997-201ENSMUST00000157910 105 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm25868-201ENSMUST00000158253 114 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm24002-201ENSMUST00000158456 104 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm25715-201ENSMUST00000158627 125 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm26189-201ENSMUST00000179879 107 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm29613-201ENSMUST00000185846 313 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm29544-201ENSMUST00000188860 313 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm28808-201ENSMUST00000190978 313 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm37801-201ENSMUST00000194754 274 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm38154-201ENSMUST00000195444 340 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm43739-201ENSMUST00000198294 307 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm44011-201ENSMUST00000203336 394 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm18039-201ENSMUST00000217816 728 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm25636-201ENSMUST00000082666 133 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Olfr575-201ENSMUST00000084812 957 ntBASIC0.56□□□□□ -2.32
Trav12-1A0N8R1 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm23011-201ENSMUST00000104148 132 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm23202-201ENSMUST00000104376 129 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm14594-201ENSMUST00000118052 537 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm14590-201ENSMUST00000118934 537 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm15452-201ENSMUST00000119877 240 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm25544-201ENSMUST00000122676 120 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm25115-201ENSMUST00000157187 140 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm24808-201ENSMUST00000157993 118 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm17052-201ENSMUST00000165496 289 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm14596-201ENSMUST00000180268 537 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm14595-201ENSMUST00000180335 537 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm29005-201ENSMUST00000186773 320 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm44482-201ENSMUST00000199232 103 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm19649-201ENSMUST00000201126 822 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm10264-201ENSMUST00000220589 429 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Gm22062-201ENSMUST00000082563 107 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Mir196b-201ENSMUST00000083509 85 ntBASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Trav12-1A0N8R1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm12313-201ENSMUST00000121347 421 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm15878-201ENSMUST00000127561 306 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm27396-201ENSMUST00000157708 58 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Mir3109-201ENSMUST00000175301 88 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm24100-201ENSMUST00000178592 79 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm25933-201ENSMUST00000178943 108 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm26652-202ENSMUST00000181672 475 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm18356-201ENSMUST00000185677 623 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm44324-201ENSMUST00000198517 135 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm43583-201ENSMUST00000199235 303 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm26328-201ENSMUST00000082821 107 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm25794-201ENSMUST00000083286 107 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm26166-201ENSMUST00000083788 107 ntBASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
Trav12-1A0N8R1 Gm22785-201ENSMUST00000104087 132 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm23760-201ENSMUST00000158350 116 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm23267-201ENSMUST00000178490 132 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Olfr1285-201ENSMUST00000208523 903 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm45907-201ENSMUST00000213023 193 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm2628-201ENSMUST00000218019 426 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm46993-201ENSMUST00000220708 259 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm23628-201ENSMUST00000082464 173 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm24622-201ENSMUST00000082619 162 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm24494-201ENSMUST00000083804 81 ntBASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trav12-1A0N8R1 Mir544-201ENSMUST00000103813 78 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms