Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm4910-201ENSMUST00000119605 366 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm14215-201ENSMUST00000120578 221 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm24476-201ENSMUST00000157437 131 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm24851-201ENSMUST00000158028 103 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25944-201ENSMUST00000178758 94 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm27717-201ENSMUST00000183933 151 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45375-201ENSMUST00000210338 280 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45907-201ENSMUST00000213023 193 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm10298-201ENSMUST00000074801 265 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25636-201ENSMUST00000082666 133 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25138-201ENSMUST00000083248 136 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23846-201ENSMUST00000083835 107 ntBASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23605-201ENSMUST00000157255 127 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25637-201ENSMUST00000157529 107 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm24997-201ENSMUST00000157910 105 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm17655-201ENSMUST00000167969 255 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25020-201ENSMUST00000178071 107 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm20874-201ENSMUST00000178356 663 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Mir6365-201ENSMUST00000183990 101 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm29037-201ENSMUST00000189092 313 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm42719-201ENSMUST00000197393 355 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm44011-201ENSMUST00000203336 394 ntBASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.09□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.09□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.09□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm22796-201ENSMUST00000157234 106 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25011-201ENSMUST00000158398 126 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm22664-201ENSMUST00000158719 105 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28838-201ENSMUST00000186338 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm29635-201ENSMUST00000187221 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm29026-201ENSMUST00000187787 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28797-201ENSMUST00000188543 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28855-201ENSMUST00000188680 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28705-201ENSMUST00000189548 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28939-201ENSMUST00000190351 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28223-201ENSMUST00000190469 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm29092-201ENSMUST00000190768 315 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23370-202ENSMUST00000197008 129 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm17937-201ENSMUST00000197908 742 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm44976-201ENSMUST00000205543 261 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm46993-201ENSMUST00000220708 259 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm9795-201ENSMUST00000062156 693 ntBASIC0.09□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25938-201ENSMUST00000104139 166 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm649-201ENSMUST00000117284 1054 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm11490-201ENSMUST00000118128 272 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm13482-201ENSMUST00000119842 254 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24401-201ENSMUST00000157868 91 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm26195-201ENSMUST00000175035 101 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24366-201ENSMUST00000175383 86 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm38044-201ENSMUST00000192964 487 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Trbv24-201ENSMUST00000194614 347 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm43402-201ENSMUST00000197159 159 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm43232-201ENSMUST00000201346 364 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm43911-201ENSMUST00000203097 76 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm45344-201ENSMUST00000211610 341 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23102-201ENSMUST00000083724 116 ntBASIC0.08□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm22678-201ENSMUST00000116974 101 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23463-201ENSMUST00000122468 99 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm22706-201ENSMUST00000157907 112 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm22929-201ENSMUST00000175517 107 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25942-201ENSMUST00000180080 110 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm27420-201ENSMUST00000183823 79 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Mir6917-201ENSMUST00000184111 61 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm9251-201ENSMUST00000197202 628 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm44336-201ENSMUST00000203696 468 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm19709-201ENSMUST00000215403 482 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm20102-201ENSMUST00000222445 220 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 AC154257.2-201ENSMUST00000224166 340 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms