Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Gm38041-201ENSMUST00000194445 661 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Mir6962-201ENSMUST00000199512 63 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Gm45240-201ENSMUST00000211437 674 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Gm10092-201ENSMUST00000077110 180 ntBASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Trav8-1A0A075B641 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm11813-201ENSMUST00000118586 291 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm12825-201ENSMUST00000120249 563 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm14600-201ENSMUST00000121032 630 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm11363-201ENSMUST00000121672 548 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm21978-201ENSMUST00000179696 377 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm18356-201ENSMUST00000185677 623 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm29288-201ENSMUST00000191582 901 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm37946-201ENSMUST00000192064 347 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm34139-201ENSMUST00000196166 294 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm9402-201ENSMUST00000196849 388 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm44482-201ENSMUST00000199232 103 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm43583-201ENSMUST00000199235 303 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.53□□□□□ -2.32
Trav8-1A0A075B641 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm15214-201ENSMUST00000122155 470 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm26414-201ENSMUST00000157674 269 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm25457-201ENSMUST00000179509 107 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm27245-201ENSMUST00000184385 376 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm22062-201ENSMUST00000082563 107 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm23452-201ENSMUST00000083327 107 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.52□□□□□ -2.33
Trav8-1A0A075B641 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm12370-201ENSMUST00000117809 604 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm11575-201ENSMUST00000122243 228 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm25544-201ENSMUST00000122676 120 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm23956-201ENSMUST00000157211 119 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm24773-201ENSMUST00000158513 99 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm23208-201ENSMUST00000158666 127 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm22392-201ENSMUST00000177971 107 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm21827-201ENSMUST00000178247 423 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm27660-201ENSMUST00000184028 208 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm28995-201ENSMUST00000186625 261 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm42647-201ENSMUST00000195939 459 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm24622-201ENSMUST00000082619 162 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Mir27b-201ENSMUST00000083541 73 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Gm23042-201ENSMUST00000083866 101 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Snord35a-201ENSMUST00000083884 90 ntBASIC0.51□□□□□ -2.33
Trav8-1A0A075B641 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm14554-201ENSMUST00000119548 661 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm14852-201ENSMUST00000120065 647 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Mir1942-201ENSMUST00000157274 63 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm24997-201ENSMUST00000157910 105 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm24851-201ENSMUST00000158028 103 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm22800-201ENSMUST00000175627 94 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm27861-201ENSMUST00000183920 214 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Mir6335-201ENSMUST00000184081 98 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm18691-201ENSMUST00000203593 872 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm45907-201ENSMUST00000213023 193 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm30738-201ENSMUST00000221346 502 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Gm23735-201ENSMUST00000082551 134 ntBASIC0.5□□□□□ -2.33
Trav8-1A0A075B641 Mir544-201ENSMUST00000103813 78 ntBASIC0.49□□□□□ -2.33
Trav8-1A0A075B641 Gm13356-201ENSMUST00000121678 335 ntBASIC0.49□□□□□ -2.33
Trav8-1A0A075B641 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.49□□□□□ -2.33
Trav8-1A0A075B641 Gm26487-201ENSMUST00000158022 94 ntBASIC0.49□□□□□ -2.33
Trav8-1A0A075B641 Gm24942-201ENSMUST00000158328 114 ntBASIC0.49□□□□□ -2.33
Trav8-1A0A075B641 Gm3025-201ENSMUST00000163454 489 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms