Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm25392-201ENSMUST00000157335 297 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm22310-201ENSMUST00000157509 116 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm26088-201ENSMUST00000157896 131 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm22315-201ENSMUST00000158010 143 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm21893-201ENSMUST00000179119 397 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Mir6715-201ENSMUST00000184990 57 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Mir376a-201ENSMUST00000197584 68 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm22245-201ENSMUST00000082479 103 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Snord14d-201ENSMUST00000083424 86 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Gm10161-201ENSMUST00000091506 204 ntBASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Col13a1Q9R1N9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Mir541-201ENSMUST00000102097 90 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm24867-201ENSMUST00000104161 107 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm14838-201ENSMUST00000118913 248 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm6574-201ENSMUST00000120037 362 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm23602-201ENSMUST00000157258 132 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm25490-201ENSMUST00000158734 130 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm22118-201ENSMUST00000175593 171 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm40810-201ENSMUST00000219149 253 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Col13a1Q9R1N9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm24282-201ENSMUST00000104232 66 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm9157-201ENSMUST00000117673 225 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm13355-201ENSMUST00000117996 317 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm13478-201ENSMUST00000118312 413 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm12417-201ENSMUST00000119153 403 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm13541-201ENSMUST00000119519 283 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm23234-201ENSMUST00000157304 134 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm22145-201ENSMUST00000157396 148 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm24727-201ENSMUST00000158231 144 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm24799-201ENSMUST00000178431 79 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm27421-201ENSMUST00000184729 167 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm28453-203ENSMUST00000187041 189 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm29014-201ENSMUST00000191422 326 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm37923-201ENSMUST00000191624 161 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm44337-201ENSMUST00000196553 114 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm44322-201ENSMUST00000196830 115 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm44084-201ENSMUST00000203947 409 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Gm22973-201ENSMUST00000083298 191 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Col13a1Q9R1N9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm24318-201ENSMUST00000104490 131 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm12793-201ENSMUST00000119268 292 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm14782-201ENSMUST00000120151 195 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm16005-201ENSMUST00000120515 269 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm25390-201ENSMUST00000157341 103 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm25428-201ENSMUST00000157608 114 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm19123-201ENSMUST00000190716 651 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm23370-202ENSMUST00000197008 129 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Mir7118-201ENSMUST00000197760 61 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm2189-201ENSMUST00000201419 429 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm10092-201ENSMUST00000077110 180 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Snord47-201ENSMUST00000083034 77 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm23453-201ENSMUST00000083326 106 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col13a1Q9R1N9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 380 ms