Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm23713-201ENSMUST00000157353 70 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm23752-201ENSMUST00000157584 115 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm22615-201ENSMUST00000158102 70 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm23196-201ENSMUST00000158806 107 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm16584-201ENSMUST00000159267 189 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm43582-201ENSMUST00000196149 343 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm43529-201ENSMUST00000199178 412 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm44533-201ENSMUST00000207782 268 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm26263-201ENSMUST00000083281 164 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm26077-201ENSMUST00000104064 123 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm14894-201ENSMUST00000117170 270 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm13903-201ENSMUST00000120945 193 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Mir1942-201ENSMUST00000157274 63 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm24997-201ENSMUST00000157910 105 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm37449-201ENSMUST00000193016 270 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm37550-201ENSMUST00000193230 463 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm18658-201ENSMUST00000195558 270 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm44024-201ENSMUST00000203008 476 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm44142-201ENSMUST00000203358 311 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm44794-201ENSMUST00000206550 411 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm9377-201ENSMUST00000207227 623 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm25124-201ENSMUST00000083345 164 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Mir10a-201ENSMUST00000083585 110 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm26108-201ENSMUST00000083973 191 ntBASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upk3aQ9JKX8 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Gm15281-201ENSMUST00000125181 351 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Mir6997-201ENSMUST00000184313 71 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Gm29809-201ENSMUST00000218423 493 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Gm23517-201ENSMUST00000082830 192 ntBASIC1.88□□□□□ -2.11
Upk3aQ9JKX8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Mir669d-201ENSMUST00000104644 121 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm12235-201ENSMUST00000118596 170 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm12646-201ENSMUST00000119144 238 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm12779-201ENSMUST00000121496 143 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm14766-201ENSMUST00000121689 367 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm25325-201ENSMUST00000122559 86 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm24901-201ENSMUST00000158125 110 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm20689-201ENSMUST00000176033 279 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm21827-201ENSMUST00000178247 423 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm27490-201ENSMUST00000184754 128 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm28151-201ENSMUST00000189404 951 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm42925-201ENSMUST00000197359 285 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm44182-201ENSMUST00000204052 115 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm44825-201ENSMUST00000207557 150 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm44598-201ENSMUST00000207566 150 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.87□□□□□ -2.11
Upk3aQ9JKX8 Gm24907-201ENSMUST00000116932 128 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm12748-201ENSMUST00000120763 504 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm14551-201ENSMUST00000120802 256 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm23586-201ENSMUST00000157657 123 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm22891-201ENSMUST00000158641 164 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm22664-201ENSMUST00000158719 105 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm25163-201ENSMUST00000158905 104 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm29073-201ENSMUST00000185563 664 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms