Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm22723-201ENSMUST00000083820 129 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm25711-201ENSMUST00000158633 128 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm22891-201ENSMUST00000158641 164 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm23025-201ENSMUST00000158769 111 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm24306-201ENSMUST00000180229 79 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Mir6950-201ENSMUST00000184438 73 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm28058-201ENSMUST00000186421 264 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm9236-201ENSMUST00000196892 587 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm26379-202ENSMUST00000200225 132 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Gm45730-201ENSMUST00000212560 395 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.76□□□□□ -2.13
Cdc40Q9DC48 Mir758-201ENSMUST00000103260 81 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm13378-201ENSMUST00000117483 336 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm23381-201ENSMUST00000157676 94 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm19932-201ENSMUST00000177033 313 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cdc40Q9DC48 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm29550-201ENSMUST00000185543 285 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm37727-201ENSMUST00000191637 819 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Trbv24-201ENSMUST00000194614 347 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm42807-201ENSMUST00000200141 329 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm24268-201ENSMUST00000082990 110 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm24412-201ENSMUST00000083426 109 ntBASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
Cdc40Q9DC48 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm25090-201ENSMUST00000104000 132 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm12102-201ENSMUST00000118251 604 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm24478-201ENSMUST00000157439 158 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm24783-201ENSMUST00000157639 100 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm24837-201ENSMUST00000158683 81 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm17161-201ENSMUST00000169187 524 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm23289-201ENSMUST00000175615 108 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Mir6901-201ENSMUST00000185062 62 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm29013-201ENSMUST00000187431 237 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm37579-201ENSMUST00000194291 142 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm19032-201ENSMUST00000208584 592 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm22683-201ENSMUST00000082854 137 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm22572-201ENSMUST00000082985 105 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Cdc40Q9DC48 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.74□□□□□ -2.13
Cdc40Q9DC48 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm25377-201ENSMUST00000104334 129 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm12934-201ENSMUST00000119221 343 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm14366-201ENSMUST00000121970 730 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm15077-201ENSMUST00000122344 362 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Cdc40Q9DC48 U6.1-201ENSMUST00000157443 101 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm27396-201ENSMUST00000157708 58 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Snord11-201ENSMUST00000158468 84 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm24053-201ENSMUST00000158620 105 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm26157-201ENSMUST00000158974 126 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm29231-201ENSMUST00000179850 319 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm5900-201ENSMUST00000179862 375 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Mir6995-201ENSMUST00000183658 71 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Mir6352-201ENSMUST00000184495 116 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm35212-201ENSMUST00000196672 606 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm31230-201ENSMUST00000199725 785 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm18774-201ENSMUST00000218269 601 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm24151-201ENSMUST00000082758 141 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm23517-201ENSMUST00000082830 192 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm24045-201ENSMUST00000083113 98 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.73□□□□□ -2.13
Cdc40Q9DC48 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms