Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm22779-201ENSMUST00000104085 107 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm24338-201ENSMUST00000104205 127 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm11819-201ENSMUST00000122192 372 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm24629-201ENSMUST00000122762 89 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm23671-201ENSMUST00000157472 103 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm23641-201ENSMUST00000157857 101 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm25198-201ENSMUST00000178574 110 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm28828-201ENSMUST00000186601 696 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm38238-201ENSMUST00000194334 346 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm22571-201ENSMUST00000082984 70 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm23850-201ENSMUST00000083830 169 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.35□□□□□ -1.87
Cldnd1Q9CQX5 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm24096-201ENSMUST00000103905 110 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm24671-201ENSMUST00000104159 158 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm22674-201ENSMUST00000104413 131 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm26477-201ENSMUST00000122617 323 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm25808-201ENSMUST00000122784 284 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm26297-201ENSMUST00000179464 132 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm43583-201ENSMUST00000199235 303 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 Gm44887-201ENSMUST00000208980 178 ntBASIC3.34□□□□□ -1.87
Cldnd1Q9CQX5 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cldnd1Q9CQX5 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cldnd1Q9CQX5 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Cldnd1Q9CQX5 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm26500-201ENSMUST00000101867 106 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm14774-201ENSMUST00000117857 536 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm24348-201ENSMUST00000158710 130 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm17522-201ENSMUST00000178144 498 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm27580-201ENSMUST00000183666 149 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm28000-201ENSMUST00000184380 85 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm37361-201ENSMUST00000194345 132 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm37417-201ENSMUST00000195257 454 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Cldnd1Q9CQX5 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm23256-201ENSMUST00000102235 110 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm12815-201ENSMUST00000121737 135 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm23586-201ENSMUST00000157657 123 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm22187-201ENSMUST00000157819 129 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm5967-201ENSMUST00000172723 494 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm1833-201ENSMUST00000191608 682 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm36946-201ENSMUST00000192706 435 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm43250-201ENSMUST00000196536 273 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm46997-201ENSMUST00000222108 217 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm23625-201ENSMUST00000082457 100 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm22685-201ENSMUST00000082848 106 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Mir208a-201ENSMUST00000083498 83 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.32□□□□□ -1.88
Cldnd1Q9CQX5 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms