Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm22310-201ENSMUST00000157509 116 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm23350-201ENSMUST00000158429 103 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm24497-201ENSMUST00000177868 191 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm27465-201ENSMUST00000184290 91 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Trbv6-201ENSMUST00000193743 276 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Gm23444-201ENSMUST00000082922 191 ntBASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx6-1Q99MA9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm12412-201ENSMUST00000121867 328 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm22560-201ENSMUST00000157332 120 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm22215-201ENSMUST00000157558 96 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm22316-201ENSMUST00000158012 216 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm24898-201ENSMUST00000158133 106 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm25015-201ENSMUST00000158400 128 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm27220-201ENSMUST00000183453 262 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm27585-201ENSMUST00000183717 199 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm5329-201ENSMUST00000186898 463 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm18000-201ENSMUST00000212153 800 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm24204-201ENSMUST00000082950 107 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Mir137-201ENSMUST00000083635 73 ntBASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx6-1Q99MA9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm12443-201ENSMUST00000122308 323 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm11281-201ENSMUST00000141391 576 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm25369-201ENSMUST00000158848 132 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm37624-201ENSMUST00000193751 219 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm43427-201ENSMUST00000198188 331 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm44524-201ENSMUST00000203899 271 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm35857-201ENSMUST00000212739 178 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Snord21-201ENSMUST00000082519 94 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx6-1Q99MA9 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Snord19-201ENSMUST00000104609 76 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm16005-201ENSMUST00000120515 269 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm22521-201ENSMUST00000158272 134 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm27828-201ENSMUST00000184108 119 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm45687-201ENSMUST00000209454 155 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm25205-201ENSMUST00000082841 103 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Gm23850-201ENSMUST00000083830 169 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx6-1Q99MA9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.59□□□□□ -1.84
Nkx6-1Q99MA9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Nkx6-1Q99MA9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.59□□□□□ -1.84
Nkx6-1Q99MA9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Nkx6-1Q99MA9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nkx6-1Q99MA9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms