Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc9Q8VC31 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc9Q8VC31 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ccdc9Q8VC31 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm15844-201ENSMUST00000118016 576 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm23901-201ENSMUST00000157570 107 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm3027-201ENSMUST00000167579 451 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm26960-201ENSMUST00000182263 412 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm7871-201ENSMUST00000195346 618 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm32381-201ENSMUST00000203192 476 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm45445-201ENSMUST00000209586 232 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Gm26329-201ENSMUST00000093723 110 ntBASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc9Q8VC31 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm14915-201ENSMUST00000120747 204 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm25333-201ENSMUST00000158035 246 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm6788-201ENSMUST00000166459 270 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Mir3112-201ENSMUST00000175431 82 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm20660-201ENSMUST00000177515 289 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm22263-201ENSMUST00000180060 104 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm27783-201ENSMUST00000183534 105 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm27470-201ENSMUST00000184070 210 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm19498-201ENSMUST00000191128 331 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm38044-201ENSMUST00000192964 487 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm38183-201ENSMUST00000193189 205 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm44478-201ENSMUST00000204875 114 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm44811-201ENSMUST00000209120 228 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm4945-201ENSMUST00000075152 453 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Snord47-201ENSMUST00000083034 77 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.44□□□□□ -1.86
Ccdc9Q8VC31 Gm44133-202ENSMUST00000204450 2586 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm14774-201ENSMUST00000117857 536 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm22330-201ENSMUST00000158068 115 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm27521-201ENSMUST00000184022 64 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm27747-201ENSMUST00000184707 85 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm21937-201ENSMUST00000222825 218 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm10038-201ENSMUST00000077233 441 ntBASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Ccdc9Q8VC31 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm22115-201ENSMUST00000103976 133 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm23923-201ENSMUST00000104108 133 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm14823-201ENSMUST00000117698 238 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm7327-201ENSMUST00000120925 652 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm13913-201ENSMUST00000121126 260 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm24436-201ENSMUST00000157889 302 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm23476-201ENSMUST00000158881 274 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm44609-201ENSMUST00000207157 460 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Mir184-201ENSMUST00000083662 69 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm26164-201ENSMUST00000083793 104 ntBASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Ccdc9Q8VC31 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm22831-201ENSMUST00000102473 109 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm15526-201ENSMUST00000112504 204 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm14602-201ENSMUST00000118625 340 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm14792-201ENSMUST00000119725 258 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm12238-201ENSMUST00000127764 124 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm24001-201ENSMUST00000158463 85 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm24577-201ENSMUST00000158580 63 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm24518-201ENSMUST00000180275 94 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm28399-201ENSMUST00000186221 318 ntBASIC3.41□□□□□ -1.86
Ccdc9Q8VC31 Gm28572-201ENSMUST00000187444 318 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms