Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm45315-201ENSMUST00000209283 333 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm45313-201ENSMUST00000210584 178 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Ushbp1Q8R370 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm25856-201ENSMUST00000082786 75 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm13457-201ENSMUST00000117885 267 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm11935-201ENSMUST00000118608 399 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm14593-201ENSMUST00000119948 294 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm14551-201ENSMUST00000120802 256 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm13725-201ENSMUST00000122139 207 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm14629-201ENSMUST00000122428 144 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm23668-201ENSMUST00000157465 111 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm18357-201ENSMUST00000188184 580 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm28358-202ENSMUST00000189292 223 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm42925-201ENSMUST00000197359 285 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm35931-201ENSMUST00000203931 448 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm18015-201ENSMUST00000214879 316 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ushbp1Q8R370 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm11065-201ENSMUST00000111462 228 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm25316-201ENSMUST00000116826 118 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm22560-201ENSMUST00000157332 120 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm22722-201ENSMUST00000157467 132 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm25373-201ENSMUST00000158156 115 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm22833-201ENSMUST00000158292 132 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm25643-201ENSMUST00000158874 103 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm25956-201ENSMUST00000175115 217 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm27521-201ENSMUST00000184022 64 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm27869-201ENSMUST00000184327 122 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm24316-201ENSMUST00000083041 107 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.59□□□□□ -1.83
Ushbp1Q8R370 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ushbp1Q8R370 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ushbp1Q8R370 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Ushbp1Q8R370 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Ushbp1Q8R370 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Mir1195-201ENSMUST00000116818 98 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm13880-201ENSMUST00000118421 474 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm9119-201ENSMUST00000118866 495 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm26256-201ENSMUST00000122499 186 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm24858-201ENSMUST00000158058 323 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm27579-201ENSMUST00000158113 63 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm24501-201ENSMUST00000158452 62 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm26214-201ENSMUST00000158581 107 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm25362-201ENSMUST00000158854 105 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm26585-201ENSMUST00000180890 630 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Mir8090-201ENSMUST00000185078 136 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm9402-201ENSMUST00000196849 388 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm44157-201ENSMUST00000204720 410 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm44881-201ENSMUST00000205425 367 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm45513-201ENSMUST00000210228 376 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm24817-201ENSMUST00000093672 105 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm650-201ENSMUST00000144428 1551 ntBASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ushbp1Q8R370 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Mir875-201ENSMUST00000104698 78 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm12646-201ENSMUST00000119144 238 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm23184-201ENSMUST00000122594 131 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm23716-201ENSMUST00000157348 144 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm24885-201ENSMUST00000158783 270 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm17187-201ENSMUST00000164622 410 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm17065-201ENSMUST00000165245 239 ntBASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ushbp1Q8R370 Mir6355-201ENSMUST00000183687 106 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms