Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir467g-201ENSMUST00000116906 120 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm13396-201ENSMUST00000120617 271 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm15223-201ENSMUST00000120989 826 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm11414-201ENSMUST00000121795 263 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm28755-201ENSMUST00000185773 199 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm29602-201ENSMUST00000186887 442 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Gm28629-201ENSMUST00000187309 263 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Vps53Q8CCB4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Vps53Q8CCB4 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.53□□□□□ -1.84
Vps53Q8CCB4 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm24839-201ENSMUST00000122602 107 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm24958-201ENSMUST00000158009 97 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm23047-201ENSMUST00000177661 94 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Mir7050-201ENSMUST00000184636 60 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm42925-201ENSMUST00000197359 285 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm43529-201ENSMUST00000199178 412 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm44425-201ENSMUST00000203739 429 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm44399-201ENSMUST00000205043 226 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm45403-201ENSMUST00000209453 276 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm45616-201ENSMUST00000211711 319 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Gm26066-201ENSMUST00000083385 109 ntBASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Vps53Q8CCB4 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm11456-201ENSMUST00000121070 256 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm12785-201ENSMUST00000122052 172 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm22322-201ENSMUST00000157151 111 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm27926-201ENSMUST00000157180 66 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm26414-201ENSMUST00000157674 269 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm22187-201ENSMUST00000157819 129 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm17522-201ENSMUST00000178144 498 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm26297-201ENSMUST00000179464 132 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm27532-201ENSMUST00000183726 113 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Mir6346-201ENSMUST00000183982 81 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm28257-201ENSMUST00000185244 463 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm28534-201ENSMUST00000187744 676 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm43510-201ENSMUST00000197922 353 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Mir466e-201ENSMUST00000198862 84 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm43746-201ENSMUST00000200028 317 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm29818-201ENSMUST00000218070 165 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Gm23850-201ENSMUST00000083830 169 ntBASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
Vps53Q8CCB4 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Mir878-201ENSMUST00000104680 78 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm7123-201ENSMUST00000117647 213 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm22598-201ENSMUST00000157600 127 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm25486-201ENSMUST00000158726 63 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm36891-201ENSMUST00000191995 655 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm9402-201ENSMUST00000196849 388 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm19202-201ENSMUST00000198096 808 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm44657-201ENSMUST00000208568 450 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Mir496a-201ENSMUST00000093627 79 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.5□□□□□ -1.85
Vps53Q8CCB4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm7853-201ENSMUST00000100708 478 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm14971-201ENSMUST00000117980 663 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm15029-201ENSMUST00000119742 199 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm12213-201ENSMUST00000119924 353 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm11388-201ENSMUST00000120908 159 ntBASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.49□□□□□ -1.85
Vps53Q8CCB4 Gm25184-201ENSMUST00000157753 163 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms