Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm13806-201ENSMUST00000117822 325 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm23381-201ENSMUST00000157676 94 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm22382-201ENSMUST00000158185 130 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm17119-201ENSMUST00000163943 280 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm29231-201ENSMUST00000179850 319 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm27640-201ENSMUST00000184580 147 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm43007-201ENSMUST00000197618 291 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm17987-201ENSMUST00000206902 603 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Mir29c-201ENSMUST00000083614 88 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm10360-201ENSMUST00000097219 272 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm23463-201ENSMUST00000122468 99 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm22769-201ENSMUST00000158367 98 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm22944-201ENSMUST00000158662 133 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm27660-201ENSMUST00000184028 208 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Gm26055-201ENSMUST00000083038 107 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Snora3-201ENSMUST00000083082 132 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC0.55□□□□□ -2.32
Col6a6Q8C6K9 Mir208b-201ENSMUST00000104735 77 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm13343-201ENSMUST00000116474 105 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Mir1904-201ENSMUST00000122702 80 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm22163-201ENSMUST00000158408 135 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm25711-201ENSMUST00000158633 128 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm25097-201ENSMUST00000104042 145 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm25108-201ENSMUST00000122473 78 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Mir466m-201ENSMUST00000175052 84 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm22418-201ENSMUST00000180326 107 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm29397-201ENSMUST00000185205 333 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm43142-201ENSMUST00000198670 361 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm43345-201ENSMUST00000199484 269 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm26439-201ENSMUST00000082592 106 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm381-201ENSMUST00000117443 2037 ntBASIC0.54□□□□□ -2.32
Col6a6Q8C6K9 Gm16428-201ENSMUST00000121193 723 ntBASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Gm11891-201ENSMUST00000121241 619 ntBASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Gm25332-201ENSMUST00000158038 105 ntBASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Gm15508-201ENSMUST00000160330 325 ntBASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Mir5129-201ENSMUST00000174938 78 ntBASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Col6a6Q8C6K9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 n-R5s216-201ENSMUST00000122755 112 ntBASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 Gm8161-201ENSMUST00000168739 481 ntBASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 Gm25739-201ENSMUST00000082886 107 ntBASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.53□□□□□ -2.33
Col6a6Q8C6K9 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm25647-201ENSMUST00000101832 78 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm25823-201ENSMUST00000101995 78 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm16162-201ENSMUST00000162296 297 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm17061-201ENSMUST00000163167 499 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm24220-201ENSMUST00000177753 79 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm25988-201ENSMUST00000177759 79 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm23471-201ENSMUST00000177886 79 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm26488-201ENSMUST00000178225 79 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm23449-201ENSMUST00000179208 79 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm25221-201ENSMUST00000180051 79 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm35736-201ENSMUST00000203681 313 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm44404-201ENSMUST00000203979 636 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm44055-201ENSMUST00000204376 247 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm15312-201ENSMUST00000118827 271 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm23172-201ENSMUST00000157160 124 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm25035-201ENSMUST00000175414 77 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm9541-201ENSMUST00000188409 502 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Gm37098-201ENSMUST00000192290 244 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 AC159246.1-201ENSMUST00000214478 249 ntBASIC0.52□□□□□ -2.33
Col6a6Q8C6K9 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms