Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim56Q80VI1 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm24987-201ENSMUST00000104453 134 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm24936-201ENSMUST00000122598 247 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm26275-201ENSMUST00000157101 268 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm22036-201ENSMUST00000157279 215 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm25438-201ENSMUST00000158281 110 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm25051-201ENSMUST00000158602 249 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm17052-201ENSMUST00000165496 289 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm27445-201ENSMUST00000184484 72 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm22620-201ENSMUST00000082700 133 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm10161-201ENSMUST00000091506 204 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.12□□□□□ -1.75
Trim56Q80VI1 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim56Q80VI1 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim56Q80VI1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim56Q80VI1 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim56Q80VI1 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim56Q80VI1 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim56Q80VI1 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm5937-201ENSMUST00000119715 643 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm23957-201ENSMUST00000157209 90 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm25015-201ENSMUST00000158400 128 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm24553-201ENSMUST00000158653 131 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm22910-201ENSMUST00000178568 132 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm6947-201ENSMUST00000186254 78 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm38238-201ENSMUST00000194334 346 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim56Q80VI1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim56Q80VI1 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.11□□□□□ -1.75
Trim56Q80VI1 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim56Q80VI1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm13504-201ENSMUST00000117490 316 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm13432-201ENSMUST00000118861 241 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm14782-201ENSMUST00000120151 195 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm23713-201ENSMUST00000157353 70 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm22615-201ENSMUST00000158102 70 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Mir6408-201ENSMUST00000183643 91 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm9377-201ENSMUST00000207227 623 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm24356-201ENSMUST00000082859 106 ntBASIC4.1□□□□□ -1.75
Trim56Q80VI1 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
Trim56Q80VI1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm25272-201ENSMUST00000104293 128 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Snord19-201ENSMUST00000104609 76 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm25519-201ENSMUST00000158392 127 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm20450-201ENSMUST00000173652 147 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm6660-201ENSMUST00000179149 468 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm37923-201ENSMUST00000191624 161 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Gm30674-201ENSMUST00000214523 392 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Trim56Q80VI1 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Snord82-201ENSMUST00000082889 70 ntBASIC4.09□□□□□ -1.75
Trim56Q80VI1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Trim56Q80VI1 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trim56Q80VI1 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trim56Q80VI1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm23530-201ENSMUST00000104564 137 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Mir872-201ENSMUST00000104728 81 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm22380-201ENSMUST00000157479 95 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm25572-201ENSMUST00000157527 172 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim56Q80VI1 Mir5127-201ENSMUST00000175295 71 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm25615-201ENSMUST00000177836 94 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm27718-201ENSMUST00000183721 86 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm44824-201ENSMUST00000207021 229 ntBASIC4.08□□□□□ -1.76
Trim56Q80VI1 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms