Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm26045-201ENSMUST00000157862 97 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Mir713-201ENSMUST00000178651 108 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22756-201ENSMUST00000180118 107 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Gm44337-201ENSMUST00000196553 114 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Gm26054-201ENSMUST00000083037 107 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24492-201ENSMUST00000083798 107 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.89□□□□□ -1.79
Sh3rf1Q69ZI1 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm4736-201ENSMUST00000100870 380 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm23697-201ENSMUST00000103897 110 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm26273-201ENSMUST00000104180 131 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm26418-201ENSMUST00000104275 137 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Mir872-201ENSMUST00000104728 81 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm11334-201ENSMUST00000121969 156 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24014-201ENSMUST00000157728 157 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm10357-201ENSMUST00000159886 264 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm25020-201ENSMUST00000178071 107 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm25457-201ENSMUST00000179509 107 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm7909-201ENSMUST00000182688 614 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm28828-201ENSMUST00000186601 696 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm37361-201ENSMUST00000194345 132 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm44887-201ENSMUST00000208980 178 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Mir34b-201ENSMUST00000083558 84 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.88□□□□□ -1.79
Sh3rf1Q69ZI1 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm14069-201ENSMUST00000120815 229 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm15799-201ENSMUST00000120899 289 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm7618-201ENSMUST00000121643 171 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm16354-201ENSMUST00000155376 150 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm23198-201ENSMUST00000158811 91 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm37791-201ENSMUST00000195081 286 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm44030-201ENSMUST00000204865 432 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm44703-201ENSMUST00000205724 248 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Sh3rf1Q69ZI1 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm13852-201ENSMUST00000122350 242 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm29408-201ENSMUST00000187536 216 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm28848-201ENSMUST00000189984 168 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm40810-201ENSMUST00000219149 253 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm18617-201ENSMUST00000222311 259 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22247-201ENSMUST00000082476 131 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.86□□□□□ -1.79
Sh3rf1Q69ZI1 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm13268-201ENSMUST00000117485 433 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm13831-201ENSMUST00000118764 302 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22107-201ENSMUST00000122548 100 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22988-201ENSMUST00000122759 144 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm26276-201ENSMUST00000157099 109 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22561-201ENSMUST00000157331 84 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22966-201ENSMUST00000157957 129 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm24739-201ENSMUST00000158855 292 ntBASIC3.85□□□□□ -1.79
Sh3rf1Q69ZI1 Gm22398-201ENSMUST00000174941 125 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms