Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm23172-201ENSMUST00000157160 124 ntBASIC0.09□□□□□ -2.39
Col12a1Q60847 Gm24218-201ENSMUST00000180163 105 ntBASIC0.09□□□□□ -2.39
Col12a1Q60847 Gm45374-201ENSMUST00000211388 136 ntBASIC0.09□□□□□ -2.39
Col12a1Q60847 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
Col12a1Q60847 AC161758.2-201ENSMUST00000228513 218 ntBASIC0.09□□□□□ -2.39
Col12a1Q60847 Gm25703-201ENSMUST00000083123 151 ntBASIC0.09□□□□□ -2.39
Col12a1Q60847 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm14674-201ENSMUST00000117816 342 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm8217-201ENSMUST00000119136 465 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm12771-201ENSMUST00000120246 135 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm15037-201ENSMUST00000120358 259 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
Col12a1Q60847 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm24412-201ENSMUST00000083426 109 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm24587-201ENSMUST00000116697 89 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm13378-201ENSMUST00000117483 336 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm23332-201ENSMUST00000157424 275 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Gm23181-201ENSMUST00000158685 110 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.09□□□□□ -2.4
Col12a1Q60847 Snord91a-201ENSMUST00000104305 93 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Mir7043-201ENSMUST00000184219 70 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Mir1291-201ENSMUST00000199842 117 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm23623-201ENSMUST00000082461 107 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Mir107-201ENSMUST00000083660 87 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Col12a1Q60847 Mir672-201ENSMUST00000102331 100 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm25557-201ENSMUST00000158084 315 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Traj60-201ENSMUST00000167781 54 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Col12a1Q60847 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Mir145b-201ENSMUST00000184434 75 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm21147-201ENSMUST00000186046 913 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm37000-201ENSMUST00000193058 428 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm24459-201ENSMUST00000082730 86 ntBASIC0.08□□□□□ -2.4
Col12a1Q60847 Gm11845-201ENSMUST00000117886 327 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm7350-201ENSMUST00000120964 636 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm25318-201ENSMUST00000122554 314 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm22016-201ENSMUST00000158793 114 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm17154-201ENSMUST00000165748 431 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Snord8-201ENSMUST00000175303 110 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm16399-201ENSMUST00000181423 219 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm27864-201ENSMUST00000183704 190 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm19599-201ENSMUST00000218898 358 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm25856-201ENSMUST00000082786 75 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm16162-201ENSMUST00000162296 297 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm23375-201ENSMUST00000175407 83 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm18588-201ENSMUST00000177308 492 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Mir6342-201ENSMUST00000183870 125 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm44559-201ENSMUST00000207177 1012 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm22507-201ENSMUST00000082773 160 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm23829-201ENSMUST00000157392 270 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Gm5329-201ENSMUST00000186898 463 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.07□□□□□ -2.4
Col12a1Q60847 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.07□□□□□ -2.4
Col12a1Q60847 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC0.07□□□□□ -2.4
Col12a1Q60847 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm24049-201ENSMUST00000102409 100 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm8858-201ENSMUST00000118259 342 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm22382-201ENSMUST00000158185 130 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm17052-201ENSMUST00000165496 289 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Col12a1Q60847 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm23907-201ENSMUST00000104595 189 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm14362-201ENSMUST00000121679 273 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm15254-201ENSMUST00000149567 273 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 n-R5s153-201ENSMUST00000083451 116 ntBASIC0.06□□□□□ -2.4
Col12a1Q60847 Gm24915-201ENSMUST00000157288 78 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm24837-201ENSMUST00000158683 81 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm23339-201ENSMUST00000158962 139 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.05□□□□□ -2.4
Col12a1Q60847 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Col12a1Q60847 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm12806-201ENSMUST00000119384 268 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm23314-201ENSMUST00000157218 107 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm22013-201ENSMUST00000158788 103 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Gm23421-201ENSMUST00000158934 104 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Mir3964-201ENSMUST00000174898 74 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Col12a1Q60847 Mir6365-201ENSMUST00000183990 101 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.05□□□□□ -2.4
Col12a1Q60847 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms