Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm7592-201ENSMUST00000160674 627 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Mir3076-201ENSMUST00000175415 60 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm22800-201ENSMUST00000175627 94 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm20689-201ENSMUST00000176033 279 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm24656-201ENSMUST00000177548 132 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm24518-201ENSMUST00000180275 94 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm27760-201ENSMUST00000185048 114 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm18971-201ENSMUST00000197240 374 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm44393-201ENSMUST00000197418 138 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm43676-201ENSMUST00000197532 540 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm44128-201ENSMUST00000204909 219 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm24982-201ENSMUST00000104456 132 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm12779-201ENSMUST00000121496 143 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm14366-201ENSMUST00000121970 730 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm23172-201ENSMUST00000157160 124 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm22217-201ENSMUST00000157556 313 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm24333-201ENSMUST00000175101 84 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Mir6399-201ENSMUST00000184050 84 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm27369-201ENSMUST00000185182 71 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm29550-201ENSMUST00000185543 285 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm37727-201ENSMUST00000191637 819 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm32175-201ENSMUST00000193641 346 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm29950-201ENSMUST00000195273 237 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Mir7021-201ENSMUST00000197026 63 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm43583-201ENSMUST00000199235 303 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm43578-201ENSMUST00000201250 459 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm44870-201ENSMUST00000207291 357 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm44666-201ENSMUST00000208544 391 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm45365-201ENSMUST00000209489 256 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav3-3Q5R1C3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm11854-201ENSMUST00000117839 446 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm12806-201ENSMUST00000119384 268 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm13804-201ENSMUST00000119552 172 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm14848-201ENSMUST00000121850 467 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm23718-201ENSMUST00000157350 307 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm24010-201ENSMUST00000157731 282 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm23641-201ENSMUST00000157857 101 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm24075-201ENSMUST00000158175 72 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm23352-201ENSMUST00000158428 64 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm22851-201ENSMUST00000178741 94 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm25074-201ENSMUST00000178782 94 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm45658-201ENSMUST00000209197 580 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-3Q5R1C3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm15266-201ENSMUST00000119635 255 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm27979-201ENSMUST00000185126 56 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm37377-201ENSMUST00000191733 304 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm44881-201ENSMUST00000205425 367 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm44910-201ENSMUST00000208451 396 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm24268-201ENSMUST00000082990 110 ntBASIC1.42□□□□□ -2.18
Trav3-3Q5R1C3 Gm25094-201ENSMUST00000103992 131 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm22674-201ENSMUST00000104413 131 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm9043-201ENSMUST00000119677 314 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm14402-201ENSMUST00000122217 508 ntBASIC1.41□□□□□ -2.18
Trav3-3Q5R1C3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms