Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm23503-201ENSMUST00000083903 107 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm15526-201ENSMUST00000112504 204 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm14215-201ENSMUST00000120578 221 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm11849-201ENSMUST00000121293 261 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm22038-201ENSMUST00000157277 242 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Mir1949-201ENSMUST00000157434 141 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm24174-201ENSMUST00000158933 111 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm2966-201ENSMUST00000166052 481 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm7953-201ENSMUST00000168278 469 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm11395-201ENSMUST00000181011 499 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm28466-201ENSMUST00000190678 659 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm43427-201ENSMUST00000198188 331 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm44408-201ENSMUST00000200205 66 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm26379-202ENSMUST00000200225 132 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm26265-201ENSMUST00000083277 135 ntBASIC1.66□□□□□ -2.14
Upf3bQ3ULL6 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm6568-201ENSMUST00000122274 697 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm27396-201ENSMUST00000157708 58 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm27028-201ENSMUST00000182303 399 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm37757-201ENSMUST00000193072 210 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm42807-201ENSMUST00000200141 329 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm43578-201ENSMUST00000201250 459 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Mir320-201ENSMUST00000083594 82 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Gm25007-201ENSMUST00000083808 133 ntBASIC1.65□□□□□ -2.15
Upf3bQ3ULL6 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm12304-201ENSMUST00000120312 385 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm23172-201ENSMUST00000157160 124 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm25454-201ENSMUST00000157947 315 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm23196-201ENSMUST00000158806 107 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm15914-201ENSMUST00000161922 309 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm24333-201ENSMUST00000175101 84 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm27588-201ENSMUST00000185096 263 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm7692-201ENSMUST00000213534 409 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Mir29c-201ENSMUST00000083614 88 ntBASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
Upf3bQ3ULL6 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Mir873a-201ENSMUST00000104863 77 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm22678-201ENSMUST00000116974 101 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm12393-201ENSMUST00000117084 848 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm14823-201ENSMUST00000117698 238 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm15115-201ENSMUST00000121145 264 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm25325-201ENSMUST00000122559 86 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm7592-201ENSMUST00000160674 627 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm24573-201ENSMUST00000175499 112 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm19932-201ENSMUST00000177033 313 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm18775-201ENSMUST00000190763 586 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm38041-201ENSMUST00000194445 661 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm43510-201ENSMUST00000197922 353 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm44128-201ENSMUST00000204909 219 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm10297-201ENSMUST00000207136 651 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm45590-201ENSMUST00000209715 262 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm18703-201ENSMUST00000215318 333 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm22508-201ENSMUST00000082772 110 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Gm10360-201ENSMUST00000097219 272 ntBASIC1.63□□□□□ -2.15
Upf3bQ3ULL6 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm13885-201ENSMUST00000117569 187 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm14887-201ENSMUST00000119522 663 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm16129-201ENSMUST00000152628 486 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm23718-201ENSMUST00000157350 307 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm23752-201ENSMUST00000157584 115 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm24439-201ENSMUST00000157894 117 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm27265-201ENSMUST00000183559 77 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm10193-201ENSMUST00000188288 231 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm37162-201ENSMUST00000191708 551 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm19032-201ENSMUST00000208584 592 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm22620-201ENSMUST00000082700 133 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Gm26263-201ENSMUST00000083281 164 ntBASIC1.62□□□□□ -2.15
Upf3bQ3ULL6 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Upf3bQ3ULL6 Gm13356-201ENSMUST00000121678 335 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 1226.7 ms