Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm24458-201ENSMUST00000083204 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24018-201ENSMUST00000083232 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25794-201ENSMUST00000083286 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25790-201ENSMUST00000083293 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22973-201ENSMUST00000083298 191 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22295-201ENSMUST00000083311 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25127-201ENSMUST00000083336 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26121-201ENSMUST00000083364 162 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25583-201ENSMUST00000083413 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25577-201ENSMUST00000083414 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24414-201ENSMUST00000083434 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24861-201ENSMUST00000083459 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24803-201ENSMUST00000083693 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23103-201ENSMUST00000083725 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22580-201ENSMUST00000083727 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24260-201ENSMUST00000083741 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23732-201ENSMUST00000083751 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22154-201ENSMUST00000083844 131 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22682-201ENSMUST00000083854 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25869-201ENSMUST00000083855 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24693-201ENSMUST00000083885 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26317-201ENSMUST00000083894 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24448-201ENSMUST00000083979 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22798-201ENSMUST00000083992 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26427-201ENSMUST00000093648 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22886-201ENSMUST00000093714 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22170-201ENSMUST00000097247 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Mir701-201ENSMUST00000102208 109 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm16242-201ENSMUST00000117741 334 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm11367-201ENSMUST00000117802 120 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm23791-201ENSMUST00000122553 293 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm5958-201ENSMUST00000147698 297 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm25621-201ENSMUST00000157223 114 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm23234-201ENSMUST00000157304 134 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm27723-201ENSMUST00000157398 63 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm23557-201ENSMUST00000157820 138 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm26041-201ENSMUST00000158148 108 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm20534-201ENSMUST00000172957 172 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm8274-201ENSMUST00000219820 463 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Snord47-201ENSMUST00000083034 77 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.98□□□□□ -1.93
Col28a1Q2UY11 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm13329-201ENSMUST00000117063 265 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm22722-201ENSMUST00000157467 132 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm24720-201ENSMUST00000157518 166 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm22833-201ENSMUST00000158292 132 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm22433-201ENSMUST00000158550 142 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm28921-201ENSMUST00000190219 378 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Col28a1Q2UY11 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Col28a1Q2UY11 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Col28a1Q2UY11 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Col28a1Q2UY11 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm16021-201ENSMUST00000121176 219 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm27510-201ENSMUST00000158214 64 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm28282-201ENSMUST00000186072 186 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm28623-201ENSMUST00000187219 192 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm20257-202ENSMUST00000188643 130 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm19620-201ENSMUST00000195972 434 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm44977-201ENSMUST00000205283 420 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm45296-201ENSMUST00000209625 205 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm45859-201ENSMUST00000212794 214 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm10092-201ENSMUST00000077110 180 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm22245-201ENSMUST00000082479 103 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm23932-201ENSMUST00000082914 107 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.96□□□□□ -1.94
Col28a1Q2UY11 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Mir687-201ENSMUST00000102166 89 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm13761-201ENSMUST00000117238 807 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm12191-201ENSMUST00000118307 348 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Gm9703-201ENSMUST00000119573 343 ntBASIC2.95□□□□□ -1.94
Col28a1Q2UY11 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms