Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm23517-201ENSMUST00000082830 192 ntBASIC3.65□□□□□ -1.83
Sox9Q04887 Gm22685-201ENSMUST00000082848 106 ntBASIC3.65□□□□□ -1.83
Sox9Q04887 Mir208a-201ENSMUST00000083498 83 ntBASIC3.65□□□□□ -1.83
Sox9Q04887 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Sox9Q04887 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sox9Q04887 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Sox9Q04887 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sox9Q04887 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sox9Q04887 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sox9Q04887 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sox9Q04887 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sox9Q04887 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sox9Q04887 Gm5762-201ENSMUST00000119204 258 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm12686-201ENSMUST00000120546 397 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm23753-201ENSMUST00000157575 149 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm23760-201ENSMUST00000158350 116 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm23775-201ENSMUST00000158991 249 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm23355-201ENSMUST00000177614 107 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm23148-201ENSMUST00000180367 107 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm43651-201ENSMUST00000199796 439 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm44010-201ENSMUST00000204432 331 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm25258-201ENSMUST00000083049 107 ntBASIC3.64□□□□□ -1.83
Sox9Q04887 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sox9Q04887 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Sox9Q04887 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sox9Q04887 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sox9Q04887 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Sox9Q04887 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sox9Q04887 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sox9Q04887 Gm22779-201ENSMUST00000104085 107 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm24640-201ENSMUST00000116949 126 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm22626-201ENSMUST00000116990 126 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm14768-201ENSMUST00000122126 678 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm11819-201ENSMUST00000122192 372 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm23641-201ENSMUST00000157857 101 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox9Q04887 Gm25749-201ENSMUST00000175485 111 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm24761-201ENSMUST00000179589 127 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm24488-201ENSMUST00000179934 127 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm25701-201ENSMUST00000179988 127 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm26431-201ENSMUST00000180199 127 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm27796-201ENSMUST00000183863 261 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm28358-202ENSMUST00000189292 223 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm28744-201ENSMUST00000189939 340 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm37713-201ENSMUST00000191746 198 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm37361-201ENSMUST00000194345 132 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Mir3535-201ENSMUST00000197651 147 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sox9Q04887 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox9Q04887 Gm25856-201ENSMUST00000082786 75 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Gm26166-201ENSMUST00000083788 107 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox9Q04887 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.63□□□□□ -1.83
Sox9Q04887 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sox9Q04887 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Sox9Q04887 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sox9Q04887 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox9Q04887 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox9Q04887 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox9Q04887 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm15377-201ENSMUST00000119594 246 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm14877-201ENSMUST00000119803 478 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox9Q04887 Gm5967-201ENSMUST00000172723 494 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm23864-201ENSMUST00000177607 107 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm27532-201ENSMUST00000183726 113 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm28921-201ENSMUST00000190219 378 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm43239-201ENSMUST00000200131 201 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm26379-202ENSMUST00000200225 132 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.62□□□□□ -1.83
Sox9Q04887 Gm18015-201ENSMUST00000214879 316 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm46233-201ENSMUST00000217831 449 ntBASIC3.62□□□□□ -1.83
Sox9Q04887 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox9Q04887 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Sox9Q04887 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Sox9Q04887 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox9Q04887 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Sox9Q04887 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox9Q04887 Gm24671-201ENSMUST00000104159 158 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm15896-201ENSMUST00000118045 440 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm11572-201ENSMUST00000119164 120 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Mir1942-201ENSMUST00000157274 63 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm23474-201ENSMUST00000158884 75 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm24976-201ENSMUST00000158972 135 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox9Q04887 Gm20630-201ENSMUST00000177387 551 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm25939-201ENSMUST00000179876 191 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox9Q04887 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm37763-201ENSMUST00000193445 120 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Gm44399-201ENSMUST00000205043 226 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.61□□□□□ -1.83
Sox9Q04887 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms